Creating animations for visualizing time resolved data.
Rename files via command line
How to use sed to rename multiple files in a single directory.
Mass File Extraction
Simple script for 'un-tar'ing and 'un-zip'ing all .tar.gz files in a single directory.
Cloning DCAMP repository
Instructions for DCAMP repository, and getting permissions to push back to the repository.
Generate Genome Diff (.gd) Files From .fastq Files
Instructions for generating .gd files from .fastq files.
Trimmomatic Commands for Trimming Adapter Sequences
Command line tools for trimming adapter sequence from NGS reads (current method).
Flexbar Commands for Trimming Adapter Sequences
Command line tools for trimming adapter sequence from NGS reads (deprecated method).
Running
breseq
on TACC
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