| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,448,493 | IS186 (–) +6 bp | 100% | intergenic (+24/+21) | nupC → / ← yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2448493 = | 0 (0.000) | 93 (1.060) | 50/74 | NT | 100% | intergenic (+24/+26) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
| ? | REL606 | 2772854 = | NA (NA) | noncoding (1/1343 nt) | IS186 | repeat region | |||||
| * | ? | REL606 | = 2448498 | 0 (0.000) | 95 (1.080) | 48/74 | NT | 100% | intergenic (+29/+21) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
| ? | REL606 | = 2774196 | NA (NA) | noncoding (1343/1343 nt) | IS186 | repeat region | |||||
Only 100 of 112 total aligned reads displayed.
GGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAT > REL606/2772806‑2772899 | ggTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAAcccc > 1:9863510/1‑51 (MQ=255)ggTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAAcccc > 1:6876638/1‑51 (MQ=255) gTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCa < 1:127256/51‑1 (MQ=255) tttATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAATCCCCa < 1:10896669/50‑1 (MQ=255) tttATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCAt < 1:2856208/51‑1 (MQ=255) tttATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCAt < 1:10211257/51‑1 (MQ=255) tATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATaa > 1:8075379/1‑51 (MQ=255) tATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATaa < 1:7163138/51‑1 (MQ=255) tATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATaa > 1:10050803/1‑51 (MQ=255) tATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATaa < 1:5495338/51‑1 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg > 1:9243185/1‑51 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg < 1:3508453/51‑1 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg < 1:3259389/51‑1 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg < 1:1815009/51‑1 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg > 1:7780638/1‑51 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg > 1:7584857/1‑51 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg < 1:4758990/51‑1 (MQ=255) tCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAgc < 1:8562844/51‑1 (MQ=255) tCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg < 1:3294035/50‑1 (MQ=255) ccccGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAgcg < 1:3903126/51‑1 (MQ=255) ccGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCt > 1:9616685/1‑51 (MQ=255) ccGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCt > 1:9903797/1‑51 (MQ=255) cGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTa > 1:6266874/1‑51 (MQ=255) cGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTa < 1:7211806/51‑1 (MQ=255) cGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTa < 1:8502415/51‑1 (MQ=255) gCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTaa < 1:5296281/51‑1 (MQ=255) gCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTaa > 1:53084/1‑51 (MQ=255) cTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc < 1:8824218/51‑1 (MQ=255) cTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc < 1:7363197/51‑1 (MQ=255) cTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc > 1:17989/1‑51 (MQ=255) tGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACt > 1:5034476/1‑51 (MQ=255) ggCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACtt < 1:10628011/51‑1 (MQ=255) gcgcGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTa < 1:6913120/51‑1 (MQ=255) cgcgGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTaa > 1:6591787/1‑51 (MQ=255) cgcgGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTaa > 1:5064186/1‑51 (MQ=255) cgcgGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTaa > 1:8347201/1‑51 (MQ=255) gcgGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAg < 1:3825717/51‑1 (MQ=255) gcgGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAg < 1:3849422/51‑1 (MQ=255) ggggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACt > 1:8325195/1‑45 (MQ=255) ggggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAggg > 1:7789254/1‑51 (MQ=255) gggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGt > 1:2816575/1‑51 (MQ=255) ggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGtt < 1:6650725/51‑1 (MQ=255) ggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGtt < 1:9400968/51‑1 (MQ=255) ggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGtt < 1:2291506/51‑1 (MQ=255) aaCACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgt > 1:6362257/1‑51 (MQ=255) aaCACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgt < 1:1338666/51‑1 (MQ=255) cacCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTgg < 1:3260973/51‑1 (MQ=255) cacCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTgg < 1:10442453/51‑1 (MQ=255) acCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGt > 1:155536/1‑51 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTgg < 1:10579780/49‑1 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTa < 1:8035109/51‑1 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTa > 1:5116249/1‑51 (MQ=255) ccTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTAt > 1:2609174/1‑51 (MQ=255) ccTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTAt < 1:2509159/51‑1 (MQ=255) ccTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTAt > 1:7647639/1‑51 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 1:5723467/1‑51 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa < 1:6426030/51‑1 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa < 1:992726/51‑1 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa < 1:10281411/51‑1 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 1:1261755/1‑51 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 1:8187666/1‑51 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa < 1:1836504/51‑1 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 1:2868925/1‑51 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 1:7760125/1‑51 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 1:7490424/1‑51 (MQ=255) gAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc < 1:4073024/51‑1 (MQ=255) gAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc < 1:9196352/51‑1 (MQ=255) gAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc < 1:6908792/51‑1 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg < 1:7252226/51‑1 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg < 1:9948689/51‑1 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg > 1:10613293/1‑51 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg < 1:5964385/51‑1 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg < 1:1585124/51‑1 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg > 1:2855590/1‑51 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGCTGTGGAATTACg > 1:9354126/1‑51 (MQ=18) aCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc > 1:4179571/1‑51 (MQ=255) aCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc > 1:843293/1‑51 (MQ=255) cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGcc < 1:8548609/51‑1 (MQ=255) cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGcc < 1:7798278/51‑1 (MQ=255) ggTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCt < 1:1345142/51‑1 (MQ=255) ggTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCt < 1:7487221/51‑1 (MQ=255) gTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg < 1:8031889/51‑1 (MQ=255) tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGa < 1:1622704/51‑1 (MQ=255) tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGa > 1:1272815/1‑51 (MQ=255) ggggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGat > 1:10057868/1‑51 (MQ=255) ggggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGat < 1:6217051/51‑1 (MQ=255) gggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGata < 1:5421394/51‑1 (MQ=40) gggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGata < 1:4103886/51‑1 (MQ=40) ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat > 1:10568275/1‑51 (MQ=38) ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat < 1:9163844/51‑1 (MQ=38) ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat > 1:4180207/1‑51 (MQ=38) ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat > 1:948731/1‑51 (MQ=38) ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat > 1:1337994/1‑51 (MQ=38) ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat < 1:7419076/51‑1 (MQ=38) gAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATg > 1:863103/1‑51 (MQ=35) gAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATg < 1:1177148/51‑1 (MQ=35) aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGa > 1:8812461/1‑51 (MQ=33) aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGa < 1:4990218/51‑1 (MQ=33) aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAt > 1:8337643/1‑51 (MQ=31) aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAt < 1:6373941/51‑1 (MQ=31) | GGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAT > REL606/2772806‑2772899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |