Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,448,493 | IS186 (–) +6 bp | 100% | intergenic (+24/+21) | nupC → / ← yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2448493 = | 0 (0.000) | 93 (1.060) | 50/74 | NT | 100% | intergenic (+24/+26) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
? | REL606 | 2772854 = | NA (NA) | noncoding (1/1343 nt) | IS186 | repeat region | |||||
* | ? | REL606 | = 2448498 | 0 (0.000) | 95 (1.080) | 48/74 | NT | 100% | intergenic (+29/+21) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
? | REL606 | = 2774196 | NA (NA) | noncoding (1343/1343 nt) | IS186 | repeat region |
Only 100 of 195 total aligned reads displayed.
ATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2448449‑2448498 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < REL606/2774196‑2774144 ATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTC < 1:5100306/51‑1 TCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCC < 1:4266790/51‑1 GCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCA > 1:8932279/1‑51 catCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCAT > 1:2601784/4‑51 CAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCAT > 1:5785699/1‑51 AGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATA > 1:8438104/1‑51 AGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATA < 1:7763632/51‑1 AGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATA > 1:4936154/1‑51 GCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAA < 1:10923489/51‑1 GCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAA < 1:9818002/51‑1 GCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAA < 1:8095500/51‑1 CACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAG > 1:10541688/1‑51 ACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGC < 1:6332460/51‑1 CTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCG > 1:5394015/1‑51 TGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGC > 1:4535221/1‑51 GTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTA < 1:2712740/51‑1 TGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAA > 1:9380346/1‑51 TGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAA > 1:1194641/1‑51 GCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAAC > 1:6137200/1‑51 GCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAAC < 1:2368023/51‑1 TGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTT > 1:1264588/1‑51 TGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTT > 1:4354174/1‑51 TAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAA < 1:752010/51‑1 AAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAG < 1:6685406/51‑1 AAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAG > 1:8645940/1‑51 GACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGG < 1:10639990/51‑1 GACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGG < 1:8078689/51‑1 GACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGG < 1:9057046/51‑1 ACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGT > 1:1806962/1‑51 CCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTT < 1:9526594/51‑1 CCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTT > 1:854290/1‑51 CCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTT > 1:6915894/1‑51 CCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTT < 1:2537830/51‑1 CATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTG > 1:365364/1‑51 TACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAA < 1:10044771/51‑1 TACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAA < 1:7041613/51‑1 CATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACC > 1:10262141/1‑51 CATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACC > 1:3828469/1‑51 CATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACC < 1:8308964/51‑1 ATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCA > 1:6794600/1‑51 ATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCA > 1:3848971/1‑51 TAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCAT < 1:4508480/51‑1 AAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATC > 1:1355367/1‑51 AAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA < 1:1370246/51‑1 AAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:4410941/1‑51 AAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:3075018/1‑51 GCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGA < 1:1137264/51‑1 GCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGA > 1:5826313/1‑51 CCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAA > 1:7643585/1‑51 CCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAA > 1:5279054/1‑51 CGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAAT < 1:9890332/51‑1 CGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAAT < 1:1679175/51‑1 CGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAAT < 1:7328518/51‑1 CGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAAT > 1:2885215/1‑51 GGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATG < 1:10426860/51‑1 GGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATG > 1:6874861/1‑51 GGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATG < 1:2251147/51‑1 GGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATG < 1:3781105/51‑1 GGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGC > 1:8346008/1‑51 GGATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCG < 1:10943699/51‑1 GATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGA > 1:8203013/1‑51 ATAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGAC > 1:7611192/1‑51 TAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACG < 1:6366238/51‑1 TAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACG < 1:10886739/51‑1 TAATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACG > 1:4966723/1‑51 AATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGC > 1:6396197/1‑51 AATTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGC > 1:4900638/1‑51 TTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCT < 1:5943985/51‑1 TTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCT > 1:3360714/1‑51 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTC < 1:4567182/51‑1 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTC < 1:6529431/51‑1 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTC < 1:9606059/51‑1 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTC > 1:10507233/1‑51 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTC < 1:565104/51‑1 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTC < 1:10793347/51‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG > 1:3962876/1‑51 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG > 1:9705158/1‑51 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG > 1:10605365/1‑51 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG < 1:6298284/51‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG < 1:7980137/51‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG < 1:1019259/51‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG > 1:1088943/1‑51 CCCATAAGCGCTAACTTAAGGGTTGAACCATCCGAAGAATGCGACGCCTCG > 1:1903384/1‑51 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG > 1:700050/1‑51 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG < 1:7203705/51‑1 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG > 1:4989680/1‑51 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG < 1:304710/51‑1 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG < 1:7228872/51‑1 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG > 1:8890756/1‑51 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < 1:7398016/51‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < 1:10825303/51‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT > 1:8958451/1‑51 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT > 1:6009513/1‑51 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT > 1:9132410/1‑51 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < 1:8397497/51‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT > 1:4784111/1‑51 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT > 1:4155704/1‑51 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < 1:7557981/51‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < 1:7107924/51‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < 1:5520370/51‑1 ATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2448449‑2448498 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGT < REL606/2774196‑2774144 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |