| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,405,131 | IS1 (–) +9 bp | coding (168‑176/1347 nt) | fadL → | long‑chain fatty acid outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2263507 | NA (NA) | 108 (1.360) | 52/100 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2405131 = | 0 (0.000) | coding (168/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter | |||||
| * | ? | REL606 | = 2405139 | 0 (0.000) | 85 (1.070) | 53/100 | 0.2 | 100% | coding (176/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter |
| ? | REL606 | 2407442 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 191 total aligned reads displayed.
CTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTC > REL606/2405081‑2405181 | cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc > 1:6184484‑M2/51‑51 (MQ=255)cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc < 1:7031079‑M2/1‑1 (MQ=255)cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc < 1:268528‑M2/1‑1 (MQ=255)cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc < 1:5808188‑M2/1‑1 (MQ=255)cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc > 1:501913‑M2/51‑51 (MQ=255)cTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAAc < 1:3733201/51‑1 (MQ=255)cTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAAc > 1:1039612/1‑51 (MQ=255)cTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAAc > 1:4328507/1‑51 (MQ=255) tGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACg > 1:2993328/1‑51 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg > 1:2407354‑M2/50‑51 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg > 1:4289823‑M2/50‑51 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg > 1:6176386‑M2/50‑51 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg > 1:5041555‑M2/50‑51 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg > 1:7299908‑M2/50‑51 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg > 1:2749574‑M2/50‑51 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg < 1:2143164‑M2/2‑1 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg < 1:1139286‑M2/2‑1 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg > 1:3168289‑M2/50‑51 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg > 1:7255457‑M2/50‑51 (MQ=255) gggCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGt < 1:5263293/51‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGt < 1:5580265‑M2/3‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGt > 1:2612800‑M2/49‑51 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTc < 1:4535604‑M2/4‑1 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTc > 1:6825500‑M2/48‑51 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCa < 1:6905658‑M2/5‑1 (MQ=255) gCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCa < 1:3253724/51‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCAg < 1:46635‑M2/6‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCAg < 1:2304419‑M2/6‑1 (MQ=255) cGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGc > 1:929936/1‑51 (MQ=255) cGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGc > 1:2508839/1‑51 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCAGc > 1:1718807‑M2/45‑51 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCAGc > 1:2943396‑M2/45‑51 (MQ=255) gggCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGcc > 1:5001249/1‑51 (MQ=255) ggCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCg < 1:237563/51‑1 (MQ=255) ggCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCg > 1:5328493/1‑51 (MQ=255) cTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGgg > 1:277425‑M1/1‑49 (MQ=255) ttATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggt < 1:6649837‑M1/51‑4 (MQ=255) tATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggta < 1:2320195‑M1/51‑5 (MQ=255) accatcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAc > 1:4876351‑M2/39‑51 (MQ=255) accatcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAc > 1:656463‑M2/39‑51 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAc < 1:1654070‑M2/13‑1 (MQ=255) ttCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaat > 1:1882656‑M1/1‑45 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAccc < 1:279302‑M2/15‑1 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAcccc > 1:6371661‑M2/36‑51 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAcccc < 1:3354982‑M2/16‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCg > 1:700491‑M2/35‑51 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCg < 1:2175287‑M2/17‑1 (MQ=255) cAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatga > 1:3137369‑M1/1‑43 (MQ=255) catacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGc > 1:1404143‑M2/34‑51 (MQ=255) aGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgac > 1:3693362‑M1/1‑42 (MQ=255) aGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgac > 1:4299094‑M1/1‑42 (MQ=255) ggggAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgact < 1:2055365‑M1/51‑11 (MQ=255) actaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGa < 1:520692‑M2/23‑1 (MQ=255) aaGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaa > 1:5797193‑M1/1‑37 (MQ=255) ctaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGAt > 1:6117524‑M2/28‑51 (MQ=255) ggCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaact < 1:4985342‑M1/51‑17 (MQ=255) gcgcAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaactt < 1:5391882‑M1/51‑18 (MQ=255) aaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTa > 1:7242594‑M2/26‑51 (MQ=255) aaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTa < 1:1868052‑M2/26‑1 (MQ=255) cgcAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaactta < 1:6815347‑M1/51‑19 (MQ=255) cgcAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaactta > 1:3585127‑M1/1‑33 (MQ=255) cAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttatt < 1:1021588‑M1/51‑21 (MQ=255) cAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttatt > 1:1176978‑M1/1‑31 (MQ=255) cAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttatt > 1:4077499‑M1/1‑31 (MQ=255) cagtaagttggcagcatccccCGTCAGCCGTAACCCCGCATTGATTACTAt < 1:5910799‑M2/30‑1 (MQ=255) agtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATg > 1:7203594‑M2/21‑51 (MQ=255) aTTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattga < 1:2737197‑M1/51‑23 (MQ=255) ttGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgat < 1:351554‑M1/51‑24 (MQ=255) gtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGt > 1:1085149‑M2/20‑51 (MQ=255) taagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGtt < 1:3447649‑M2/33‑1 (MQ=255) gCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatag < 1:1817579‑M1/51‑26 (MQ=255) gCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatag > 1:1430077‑M1/1‑26 (MQ=255) aagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGttt > 1:2880016‑M2/18‑51 (MQ=255) ccGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagt > 1:7058797‑M1/1‑25 (MQ=255) ccGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagt < 1:4050977‑M1/51‑27 (MQ=255) agttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTg > 1:1327142‑M2/17‑51 (MQ=255) gttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGa < 1:1982931‑M2/36‑1 (MQ=255) tggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGAcc < 1:1692984‑M2/38‑1 (MQ=255) tggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGAcc < 1:5094423‑M2/38‑1 (MQ=255) tgatgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgttt < 1:4509724‑M1/51‑31 (MQ=255) tgatgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgttt < 1:4112349‑M1/51‑31 (MQ=255) ggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCg > 1:5671579‑M2/13‑51 (MQ=255) gcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGc < 1:6717441‑M2/40‑1 (MQ=255) gatgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgtttt < 1:2792952‑M1/51‑32 (MQ=255) gatgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgtttt > 1:4733495‑M1/1‑20 (MQ=255) agcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGccc < 1:5300923‑M2/42‑1 (MQ=255) agcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGccc > 1:4204385‑M2/10‑51 (MQ=255) catcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGa < 1:2565927‑M2/44‑1 (MQ=255) aGGTAACGTCAGCCGggtaatgactccaacttattgatagtgttttatgtt < 1:2063871‑M1/51‑37 (MQ=255) aGGTAACGTCAGCCGggtaatgactccaacttattgatagtgttttatgtt > 1:3189353‑M1/1‑15 (MQ=255) gTAACGTCAGCCGggtaatgactccaacttattgatagtgttttatgttca < 1:1318279‑M1/51‑39 (MQ=255) accCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACAtt > 1:6031437‑M2/4‑51 (MQ=255) ccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGccc < 1:3899221‑M2/42‑1 (MQ=255) ccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACAttt > 1:1771148‑M2/3‑51 (MQ=255) ccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACAttt > 1:381738‑M2/3‑51 (MQ=255) ccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACAt < 1:876652‑M2/47‑1 (MQ=255) aaCGTCAGCCGggtaatgactccaacttattgatagtgttttatgttcaga > 1:4856508‑M1/1‑11 (MQ=255) cGTCAGCCGggtaatgactccaacttattgatagtgttttgtgttcagata < 1:5078680‑M1/51‑43 (MQ=255) cGTCAGCCGggtaatgactccaacttattgatagtgttttatgttcagata < 1:3927196‑M1/51‑43 (MQ=255) cGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGAc < 1:1466542/45‑1 (MQ=255) | CTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTC > REL606/2405081‑2405181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |