| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,405,131 | IS1 (–) +9 bp | coding (168‑176/1347 nt) | fadL → | long‑chain fatty acid outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2263507 | NA (NA) | 108 (1.360) | 52/100 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2405131 = | 0 (0.000) | coding (168/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter | |||||
| * | ? | REL606 | = 2405139 | 0 (0.000) | 85 (1.070) | 53/100 | 0.2 | 100% | coding (176/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter |
| ? | REL606 | 2407442 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGT > REL606/2263461‑2263557 | cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTcc > 1:6086398/1‑51 (MQ=31) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGc < 1:3746273/51‑1 (MQ=38) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGc > 1:6312194/1‑51 (MQ=38) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCa < 1:3408708/51‑1 (MQ=40) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCa < 1:5702458/51‑1 (MQ=40) aaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAg > 1:1030669/1‑51 (MQ=255) aaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAg < 1:6310617/51‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGa < 1:1462972/51‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGa > 1:2727655/1‑51 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGAt > 1:1617545/1‑51 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGAt < 1:2835995/51‑1 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGAt < 1:6448855/51‑1 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATa > 1:182233/1‑51 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATa > 1:3467429/1‑51 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATaa < 1:7054452/51‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGAt < 1:5535447/48‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATaaa > 1:2382555/1‑51 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATaaa < 1:6645254/51‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATaaa < 1:4003222/51‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAg > 1:7203338/1‑51 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAg > 1:5950581/1‑51 (MQ=255) atcatACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGa > 1:5822792/1‑51 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGAc > 1:648231/1‑51 (MQ=255) catACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACt > 1:6266748/1‑51 (MQ=255) catACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACt > 1:1724395/1‑51 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTaa < 1:96780/51‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTaa < 1:5067573/51‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTaa > 1:1166497/1‑51 (MQ=255) acacTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAAt > 1:4784261/1‑51 (MQ=255) cacTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATc < 1:4246877/51‑1 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCa < 1:3249480/51‑1 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCa < 1:5776621/51‑1 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCt < 1:4426596/51‑1 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCt < 1:3045160/51‑1 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCt > 1:1149910/1‑51 (MQ=255) aTCAGTAAGTTGGTAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGt < 1:1398865/51‑1 (MQ=255) aTCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGt > 1:2552768/1‑51 (MQ=255) tCAGTAAGTTGGCAGCATCACTGTCCGGCAGATAAAGACTAATCACCTGTa > 1:2855549/1‑51 (MQ=255) tCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTa > 1:6587574/1‑51 (MQ=255) tCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTa > 1:2992073/1‑51 (MQ=255) tCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTa < 1:3141882/51‑1 (MQ=255) tCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTa > 1:5337334/1‑51 (MQ=255) tCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTa < 1:5720270/51‑1 (MQ=255) cAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGt < 1:2537901/49‑1 (MQ=255) cAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAg > 1:6354805/1‑51 (MQ=255) aGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAgg < 1:4502679/51‑1 (MQ=255) aGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAgg > 1:4152645/1‑51 (MQ=255) aGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAgg < 1:6277469/51‑1 (MQ=255) tAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGcc < 1:1778216/51‑1 (MQ=255) aaGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCa < 1:5212830/51‑1 (MQ=255) ttGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAg > 1:1572311/1‑44 (MQ=255) ttGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAg > 1:2705264/1‑44 (MQ=255) ttGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGAt < 1:4501300/51‑1 (MQ=255) ggCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATaa > 1:6077267/1‑51 (MQ=255) cagcaTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGcc > 1:1754168/1‑43 (MQ=255) cagcaTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGa < 1:3918432/51‑1 (MQ=255) agcaTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATaa > 1:2796608/1‑48 (MQ=255) agcaTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAc < 1:6617643/51‑1 (MQ=255) agcaTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAc < 1:4726770/51‑1 (MQ=255) caTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGcc > 1:1736815/1‑40 (MQ=255) caTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGcc > 1:1675882/1‑40 (MQ=255) caTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAcgc < 1:437936/51‑1 (MQ=255) caTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAcgc < 1:5121837/51‑1 (MQ=255) aTCACCGTCCGGCAGATAAAGACTAATCACCTGTa > 1:1802562/1‑35 (MQ=255) aTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATaa > 1:5399843/1‑45 (MQ=255) aTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAcgcg < 1:3671875/51‑1 (MQ=255) aTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAcgcg > 1:4650103/1‑51 (MQ=255) aTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAcgcg < 1:5250660/51‑1 (MQ=255) aTCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAcgcg > 1:6587295/1‑51 (MQ=255) tCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGt < 1:6013633/51‑1 (MQ=255) tCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGt < 1:6053454/51‑1 (MQ=255) cACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGtt < 1:3110251/51‑1 (MQ=255) aCCGTCCGGCAGATAAAGACTAATCACCTGTAgg > 1:200129/1‑34 (MQ=255) aCCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTa < 1:3928093/51‑1 (MQ=255) ccGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAg < 1:5190082/51‑1 (MQ=255) cGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGtt > 1:6916395/1‑48 (MQ=255) cGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAgt > 1:5019153/1‑51 (MQ=255) cGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAgt < 1:1695396/51‑1 (MQ=255) | CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGT > REL606/2263461‑2263557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |