Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 4,462,655 IS1 (+) +9 bp intergenic (‑85/‑100) yjgM ← / → yjgN predicted acetyltransferase/conserved inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 4462655 =0 (0.000)97 (1.220) 55/100 0.1 100% intergenic (‑85/‑108) yjgM/yjgN predicted acetyltransferase/conserved inner membrane protein
?REL606 4521571 = NA (NA)noncoding (768/768 nt) IS1 repeat region
* ? REL606 = 44626630 (0.000)93 (1.190) 44/98 0.6 100% intergenic (‑93/‑100) yjgM/yjgN predicted acetyltransferase/conserved inner membrane protein
?REL606 = 4506109 NA (NA)noncoding (1/768 nt) IS1 repeat region

GTTCTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/4462704‑4462655
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  >  REL606/4521571‑4521620
                                                                                                    
GTTCTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTG                                                   <  1:4245917/51‑1
GTTCTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTG                                                   <  1:6049063/51‑1
  TCTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGT                                                 <  1:27704/51‑1
  TCTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGG                                                  >  1:4593553/1‑50
   CTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTA                                                >  1:4755748/1‑51
   CTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTA                                                >  1:1769552/1‑51
   CTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTA                                                <  1:297476/51‑1
    TGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAA                                               >  1:3520353/1‑51
    TGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAA                                               >  1:210915/1‑51
    TGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAA                                               >  1:6129170/1‑51
     GCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAAT                                              >  1:5850011/1‑51
     GCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAAT                                              <  1:5622447/51‑1
     GCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAAT                                              <  1:3917691/51‑1
     GCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAAT                                              <  1:4932476/51‑1
      CCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATG                                             <  1:1149395/51‑1
      CCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATG                                             >  1:858048/1‑51
       CACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGA                                            >  1:5889780/1‑51
       CACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGA                                            >  1:1425414/1‑51
        ACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGAC                                           <  1:4396962/51‑1
         CGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACT                                          <  1:4896913/51‑1
         CGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACT                                          <  1:2229173/51‑1
         CGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACT                                          <  1:716203/51‑1
         CGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACT                                          >  1:4630366/1‑51
          GTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTC                                         >  1:4072779/1‑51
           TTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCC                                        >  1:1476425/1‑51
            TACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCA                                       >  1:1872050/1‑51
            TACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCA                                       >  1:3723860/1‑51
            TACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCA                                       >  1:3389805/1‑51
            TACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCA                                       <  1:2623650/51‑1
             ACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAA                                      <  1:6273134/51‑1
             ACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAA                                      >  1:2063881/1‑51
             ACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAA                                      <  1:6188352/51‑1
              CAATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAAC                                     >  1:1514183/1‑51
               AATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACT                                    <  1:2952069/51‑1
                ATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTT                                   >  1:5552442/1‑51
                ATACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTT                                   >  1:7196524/1‑51
                 TACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTA                                  <  1:3222568/51‑1
                  ACTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTAT                                 >  1:3821886/1‑51
                   CTCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATT                                <  1:5452440/51‑1
                    TCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTG                               <  1:6326517/51‑1
                    TCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTG                               >  1:6821125/1‑51
                    TCTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATT                                >  1:875977/1‑50
                     CTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGA                              <  1:6606051/51‑1
                     CTTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGA                              <  1:3162970/51‑1
                      TTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGAT                             <  1:1606108/51‑1
                      TTATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTAAT                             <  1:955454/51‑1
                       TATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATA                            >  1:4864169/1‑51
                       TATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATA                            >  1:7049425/1‑51
                        ATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAG                           >  1:4277779/1‑51
                        ATCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAG                           <  1:6386928/51‑1
                         TCAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGT                          <  1:2330677/51‑1
                          CAGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTG                         <  1:2213358/51‑1
                           AGTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGT                        <  1:505263/51‑1
                            GTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTT                       <  1:297943/51‑1
                            GTAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTT                       >  1:413763/1‑51
                             TAATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTT                      >  1:6334785/1‑51
                              AATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTT                     >  1:7083067/1‑51
                              AATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTT                     <  1:6675000/51‑1
                               ATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTA                    <  1:3806956/51‑1
                               ATAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTA                    <  1:6376854/51‑1
                                TAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTAT                   >  1:4835066/1‑51
                                TAGGCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTAT                   >  1:4565105/1‑51
                                   GCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTTTTTTATGTT                <  1:3907193/51‑1
                                   GCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTT                <  1:2274971/51‑1
                                   GCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTT                <  1:954134/51‑1
                                   GCTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTT                <  1:1207433/51‑1
                                    CTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTC               >  1:6344214/1‑51
                                    CTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTC               >  1:5281469/1‑51
                                    CTGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTC               >  1:5599020/1‑51
                                     TGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCA              >  1:629471/1‑51
                                     TGGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCA              >  1:3168882/1‑51
                                      GGCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAG             <  1:5790901/51‑1
                                       GCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGA            <  1:5770038/51‑1
                                       GCAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGA            <  1:4780592/51‑1
                                        CAAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAT           <  1:1380089/51‑1
                                         AAAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATA          <  1:34201/51‑1
                                          AAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAA         <  1:2626949/51‑1
                                          AAAACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAA         >  1:1831882/1‑51
                                             ACTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGC      <  1:1888093/51‑1
                                              CTTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCC     <  1:1033056/51‑1
                                               TTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC    >  1:602650/1‑51
                                                TTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG   <  1:6103854/51‑1
                                                TTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG   <  1:270133/51‑1
                                                TTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG   >  1:5954443/1‑51
                                                TTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG   >  1:5849390/1‑51
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  >  1:5587636/1‑51
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  >  1:6289906/1‑51
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  <  1:4245178/51‑1
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  >  1:4015018/1‑51
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  >  1:3512157/1‑51
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  <  1:5961335/51‑1
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  <  1:2437727/51‑1
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  <  1:241958/51‑1
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  <  1:2393513/51‑1
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  <  1:2387065/51‑1
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  <  1:1063034/51‑1
                                                 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  <  1:4346681/51‑1
                                                                                                    
GTTCTGCCACGTTACAATACTCTTATCAGTAATAGGCTGGCAAAAACTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/4462704‑4462655
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA  >  REL606/4521571‑4521620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.