| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,462,655 | IS1 (+) +9 bp | intergenic (‑85/‑100) | yjgM ← / → yjgN | predicted acetyltransferase/conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4462655 = | 0 (0.000) | 97 (1.220) | 55/100 | 0.1 | 100% | intergenic (‑85/‑108) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | 4521571 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 4462663 | 0 (0.000) | 93 (1.190) | 44/98 | 0.6 | 100% | intergenic (‑93/‑100) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | = 4506109 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
Only 100 of 184 total aligned reads displayed.
TACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTG > REL606/4462613‑4462713 | tatctgaacataaaacactatcaataagttggagtcattaccAAAGttttt < 1:34201‑M1/9‑1 (MQ=255) atctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTg < 1:1380089‑M1/10‑1 (MQ=255) aCCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTg < 1:1570660‑M1/51‑2 (MQ=255) tctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGc < 1:4780592‑M1/11‑1 (MQ=255) ctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGcc < 1:5790901‑M1/12‑1 (MQ=255) gaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAg > 1:5599020‑M1/38‑51 (MQ=255) ctctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtga > 1:3622655‑M1/1‑46 (MQ=255) aacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:954134‑M1/15‑1 (MQ=255) aacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:1207433‑M1/15‑1 (MQ=255) aacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:2274971‑M1/15‑1 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg < 1:4844010‑M1/51‑8 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg > 1:1627729‑M1/1‑44 (MQ=255) ttcttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctg > 1:146041‑M1/1‑41 (MQ=255) taaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAt < 1:3806956‑M1/19‑1 (MQ=255) taaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAt < 1:6376854‑M1/19‑1 (MQ=255) aaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAtt < 1:6675000‑M1/20‑1 (MQ=255) cttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcc > 1:5451171‑M1/1‑39 (MQ=255) aaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTa > 1:6334785‑M1/31‑51 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca > 1:620591‑M1/1‑38 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca > 1:7110907‑M1/1‑38 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca < 1:2792036‑M1/51‑14 (MQ=255) aacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTAc < 1:297943‑M1/22‑1 (MQ=255) aacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTAc > 1:413763‑M1/30‑51 (MQ=255) tACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaa < 1:4248604‑M1/51‑15 (MQ=255) tACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaa < 1:6501891‑M1/51‑15 (MQ=255) tACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaa > 1:5783580‑M1/1‑37 (MQ=255) acactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACt < 1:505263‑M1/23‑1 (MQ=255) cactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTg < 1:2213358‑M1/24‑1 (MQ=255) actatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGa < 1:2330677‑M1/25‑1 (MQ=255) gTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaactt < 1:5716979‑M1/51‑18 (MQ=255) ctatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGAt > 1:4277779‑M1/26‑51 (MQ=255) tatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATa > 1:7049425‑M1/25‑51 (MQ=255) tcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAag < 1:3162970‑M1/29‑1 (MQ=255) tcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAag < 1:6606051‑M1/29‑1 (MQ=255) gcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactg > 1:726021‑M1/1‑30 (MQ=255) gcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactg < 1:6388127‑M1/51‑22 (MQ=255) caataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga < 1:6326517‑M1/30‑1 (MQ=255) caataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga > 1:6821125‑M1/22‑51 (MQ=255) aataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga > 1:875977‑M1/21‑50 (MQ=255) ataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGt > 1:3821886‑M1/20‑51 (MQ=255) aaGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgat > 1:3116066‑M1/1‑28 (MQ=255) taagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTa < 1:3222568‑M1/33‑1 (MQ=255) aGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatt > 1:3706116‑M1/1‑27 (MQ=255) aagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTAt > 1:7196524‑M1/18‑51 (MQ=255) aagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTAt > 1:5552442‑M1/18‑51 (MQ=255) cATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattta < 1:3832197‑M1/51‑27 (MQ=255) cATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattta < 1:1700478‑M1/51‑27 (MQ=255) gttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTg > 1:1514183‑M1/16‑51 (MQ=255) ttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGt < 1:6273134‑M1/37‑1 (MQ=255) ttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGt > 1:2063881‑M1/15‑51 (MQ=255) tggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTa < 1:2623650‑M1/38‑1 (MQ=255) ttATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgt > 1:2085255‑M1/1‑21 (MQ=255) ttATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgt > 1:265795‑M1/1‑21 (MQ=255) tataAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgta > 1:4862051‑M1/1‑20 (MQ=255) gagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAAc > 1:4072779‑M1/12‑51 (MQ=255) ataAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtat > 1:2476302‑M1/1‑19 (MQ=255) agtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACg < 1:2229173‑M1/41‑1 (MQ=255) agtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACg > 1:4630366‑M1/11‑51 (MQ=255) agtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACg < 1:4896913‑M1/41‑1 (MQ=255) taAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatg > 1:4720485‑M1/1‑18 (MQ=255) taAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatg > 1:1950316‑M1/1‑18 (MQ=255) tcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTg > 1:5889780‑M1/9‑51 (MQ=255) cattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTgg > 1:858048‑M1/8‑51 (MQ=255) cattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTgg < 1:1149395‑M1/44‑1 (MQ=255) aaGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgat < 1:1086039‑M1/51‑36 (MQ=255) aaGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgat < 1:3180302‑M1/51‑36 (MQ=255) attaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGc < 1:3917691‑M1/45‑1 (MQ=255) ttaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCa > 1:6129170‑M1/6‑51 (MQ=255) ttaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCa > 1:3520353‑M1/6‑51 (MQ=255) taccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAg > 1:1769552‑M1/5‑51 (MQ=255) aaTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtg < 1:1419649‑M1/51‑40 (MQ=255) ccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGa > 1:4593553‑M1/3‑50 (MQ=255) aTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgt < 1:2962273‑M1/51‑41 (MQ=255) aTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgt > 1:5663390‑M1/1‑11 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:5047595‑M1/1‑10 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:7004349‑M1/1‑10 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:6908875‑M1/1‑10 (MQ=255) cAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAAc < 1:6049063‑M1/50‑1 (MQ=255) aaaGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgttt > 1:3591169‑M1/1‑9 (MQ=255) aaGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttt > 1:5274391‑M1/1‑8 (MQ=255) aaGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttt < 1:5122951‑M1/51‑44 (MQ=255) aGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACAtt < 1:3882788/51‑1 (MQ=255) gTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACAttt < 1:1851768/51‑1 (MQ=255) tttttggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 1:1235209‑M1/1‑5 (MQ=255) tttttggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 1:5381457‑M1/1‑5 (MQ=255) tttttggtgatgctgccaacttactgatttagtgtatgatggtgtttttga < 1:4433843‑M1/51‑47 (MQ=255) ttttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag > 1:3743954‑M1/1‑4 (MQ=255) ttttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag < 1:3617764‑M1/51‑48 (MQ=255) ttttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag < 1:1948166‑M1/51‑48 (MQ=255) tttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 1:5510347‑M1/51‑49 (MQ=255) tttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 1:1362830‑M1/51‑49 (MQ=255) tttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 1:4545298‑M1/51‑49 (MQ=255) tttGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTAc > 1:6654514/1‑51 (MQ=255) ttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt < 1:7122753‑M1/51‑50 (MQ=255) ttGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTAct > 1:1253510/1‑51 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:3566930‑M1/1‑1 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:1116574‑M1/1‑1 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:5879490‑M1/1‑1 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg < 1:2549010‑M1/51‑51 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:4659441‑M1/1‑1 (MQ=255) | TACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTG > REL606/4462613‑4462713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |