| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,462,655 | IS1 (+) +9 bp | intergenic (‑85/‑100) | yjgM ← / → yjgN | predicted acetyltransferase/conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4462655 = | 0 (0.000) | 97 (1.220) | 55/100 | 0.1 | 100% | intergenic (‑85/‑108) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | 4521571 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 4462663 | 0 (0.000) | 93 (1.190) | 44/98 | 0.6 | 100% | intergenic (‑93/‑100) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | = 4506109 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
Only 100 of 183 total aligned reads displayed.
TTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACA > REL606/4462605‑4462705 | ttGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATa > 1:6110798/1‑51 (MQ=255)ttGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATa < 1:4865404/51‑1 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca < 1:4346681‑M1/1‑1 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca < 1:1063034‑M1/1‑1 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca < 1:241958‑M1/1‑1 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca < 1:5961335‑M1/1‑1 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca < 1:2393513‑M1/1‑1 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca < 1:4245178‑M1/1‑1 (MQ=255) tGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATat < 1:2855113/51‑2 (MQ=255) cgggcattatctgaacataaaacactatcaataagttggagtcattaccaa < 1:6103854‑M1/2‑1 (MQ=255) cgggcattatctgaacataaaacactatcaataagttggagtcattaccaa < 1:270133‑M1/2‑1 (MQ=255) gggcattatctgaacataaaacactatcaataagttggagtcattaccaaa > 1:602650‑M1/49‑51 (MQ=255) gTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATaaa < 1:2295804/51‑1 (MQ=255) gTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATaaa > 1:862328/1‑51 (MQ=255) gTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATaaa > 1:133885/1‑51 (MQ=255) tttAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAg > 1:7282649/1‑51 (MQ=255) ggcattatctgaacataaaacactatcaataagttggagtcattaccAAAg < 1:1033056‑M1/4‑1 (MQ=255) ttAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGt > 1:5355783/1‑51 (MQ=255) gcattatctgaacataaaacactatcaataagttggagtcattaccAAAGt < 1:1888093‑M1/5‑1 (MQ=255) tAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGtt > 1:3343204/1‑51 (MQ=255) tAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGtt < 1:1446687/51‑1 (MQ=255) tAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGtt > 1:7140217/1‑51 (MQ=255) aaTACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGttt < 1:3553150/51‑1 (MQ=255) tatctgaacataaaacactatcaataagttggagtcattaccAAAGttttt < 1:34201‑M1/9‑1 (MQ=255) tACCACTCTCTTCTTACGTGCGCAAGCATCTCATAAAGCAATAAAGttttt < 1:4123627/51‑1 (MQ=255) atctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTg < 1:1380089‑M1/10‑1 (MQ=255) aCCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTg < 1:1570660‑M1/51‑2 (MQ=255) tctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGc < 1:5770038‑M1/11‑1 (MQ=255) tctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGc < 1:4780592‑M1/11‑1 (MQ=255) ctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGcc < 1:5790901‑M1/12‑1 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCa > 1:629471‑M1/39‑51 (MQ=255) gaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAg > 1:6344214‑M1/38‑51 (MQ=255) gaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAg > 1:5599020‑M1/38‑51 (MQ=255) ctctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtga > 1:3622655‑M1/1‑46 (MQ=255) aacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:954134‑M1/15‑1 (MQ=255) aacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:1207433‑M1/15‑1 (MQ=255) aacataaaaaactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:3907193‑M1/15‑1 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg < 1:1783507‑M1/51‑8 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg > 1:1627729‑M1/1‑44 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa > 1:4565105‑M1/34‑51 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa > 1:4835066‑M1/34‑51 (MQ=255) taaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAt < 1:6376854‑M1/19‑1 (MQ=255) taaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAt < 1:3806956‑M1/19‑1 (MQ=255) tcttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgc < 1:2216201‑M1/51‑12 (MQ=255) aaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAtt < 1:6675000‑M1/20‑1 (MQ=255) aaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAtt > 1:7083067‑M1/32‑51 (MQ=255) cttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcc > 1:5451171‑M1/1‑39 (MQ=255) aaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTa > 1:6334785‑M1/31‑51 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca > 1:620591‑M1/1‑38 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca < 1:2792036‑M1/51‑14 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca > 1:2231025‑M1/1‑38 (MQ=255) aacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTAc < 1:297943‑M1/22‑1 (MQ=255) tACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaa < 1:4248604‑M1/51‑15 (MQ=255) aCGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaac > 1:5787385‑M1/1‑36 (MQ=255) actatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGa < 1:2330677‑M1/25‑1 (MQ=255) gTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaactt < 1:5716979‑M1/51‑18 (MQ=255) gcgcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttac > 1:2637558‑M1/1‑32 (MQ=255) tcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAag < 1:3162970‑M1/29‑1 (MQ=255) tcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAag < 1:6606051‑M1/29‑1 (MQ=255) cgcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttact < 1:4000280‑M1/51‑21 (MQ=255) gcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactg < 1:6388127‑M1/51‑22 (MQ=255) gcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactg > 1:726021‑M1/1‑30 (MQ=255) caataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga > 1:6821125‑M1/22‑51 (MQ=255) aataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga > 1:875977‑M1/21‑50 (MQ=255) taagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTa < 1:3222568‑M1/33‑1 (MQ=255) aGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatt > 1:3706116‑M1/1‑27 (MQ=255) gCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattt < 1:199813‑M1/51‑26 (MQ=255) aagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTAt > 1:5552442‑M1/18‑51 (MQ=255) aagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTAt > 1:7196524‑M1/18‑51 (MQ=255) cATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattta < 1:1250252‑M1/51‑27 (MQ=255) cATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattta < 1:1700478‑M1/51‑27 (MQ=255) ttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGt < 1:6273134‑M1/37‑1 (MQ=255) tCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagt < 1:5241355‑M1/51‑29 (MQ=255) tggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTa > 1:3723860‑M1/14‑51 (MQ=255) tggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTa < 1:2623650‑M1/38‑1 (MQ=255) tggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTa > 1:1872050‑M1/14‑51 (MQ=255) ttATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgt < 1:5556292‑M1/51‑31 (MQ=255) ttATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgt > 1:2085255‑M1/1‑21 (MQ=255) ggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTaa > 1:1476425‑M1/13‑51 (MQ=255) tataAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgta > 1:4862051‑M1/1‑20 (MQ=255) tataAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgt > 1:3827313‑M1/1‑20 (MQ=255) gagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAAc > 1:4072779‑M1/12‑51 (MQ=255) ataAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtat > 1:2476302‑M1/1‑19 (MQ=255) agtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACg < 1:4896913‑M1/41‑1 (MQ=255) taAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatg > 1:4720485‑M1/1‑18 (MQ=255) taAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatg > 1:5929239‑M1/1‑18 (MQ=255) cattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTgg < 1:1149395‑M1/44‑1 (MQ=255) aaGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgat < 1:3180302‑M1/51‑36 (MQ=255) attaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGc > 1:5850011‑M1/7‑51 (MQ=255) ttaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCa > 1:3520353‑M1/6‑51 (MQ=255) ttaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCa > 1:6129170‑M1/6‑51 (MQ=255) ttaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCa > 1:210915‑M1/6‑51 (MQ=255) aaTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtg < 1:1419649‑M1/51‑40 (MQ=255) ccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGa > 1:4593553‑M1/3‑50 (MQ=255) aTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgt < 1:2962273‑M1/51‑41 (MQ=255) aTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgt > 1:5663390‑M1/1‑11 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:6908875‑M1/1‑10 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:854295‑M1/1‑10 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:7004349‑M1/1‑10 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:5047595‑M1/1‑10 (MQ=255) | TTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACA > REL606/4462605‑4462705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |