| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,462,655 | IS1 (+) +9 bp | intergenic (‑85/‑100) | yjgM ← / → yjgN | predicted acetyltransferase/conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4462655 = | 0 (0.000) | 97 (1.220) | 55/100 | 0.1 | 100% | intergenic (‑85/‑108) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | 4521571 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 4462663 | 0 (0.000) | 93 (1.190) | 44/98 | 0.6 | 100% | intergenic (‑93/‑100) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | = 4506109 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTT > REL606/4506062‑4506159 | ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGc > 1:4374399/1‑51 (MQ=31)ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGc > 1:4683356/1‑51 (MQ=31)ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGc < 1:1196425/51‑1 (MQ=31)ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGc < 1:6764895/51‑1 (MQ=31) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCg > 1:4952225/1‑51 (MQ=33) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCgt < 1:2148468/51‑1 (MQ=35) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCgt > 1:5342177/1‑51 (MQ=35) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCgt > 1:3273703/1‑51 (MQ=35) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCg > 1:4810565/1‑49 (MQ=35) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCg > 1:2331845/1‑49 (MQ=35) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCgtgt > 1:1629009/1‑51 (MQ=40) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGtgtt > 1:1060047/1‑51 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGtgtt < 1:4161319/51‑1 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTgttgtt < 1:988407/51‑1 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTgttgtt < 1:5483752/51‑1 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGttgttg > 1:2650387/1‑51 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGttgttg < 1:1335181/51‑1 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGttgttg > 1:4126638/1‑51 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGttgttg < 1:4037207/51‑1 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGc < 1:5583431/51‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCa < 1:5039453/51‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCa > 1:3119998/1‑51 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGttgttg > 1:1151261/1‑48 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCaa < 1:3836152/51‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCaa > 1:3084689/1‑51 (MQ=255) atcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAAc < 1:1052266/51‑1 (MQ=255) atcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAAc < 1:1927790/51‑1 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACa > 1:6082178/1‑51 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACa < 1:2822103/51‑1 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACa > 1:4922376/1‑51 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACa > 1:2033541/1‑51 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACa < 1:3698116/51‑1 (MQ=255) catACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACAt > 1:2358208/1‑51 (MQ=255) catACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACAt < 1:3597994/51‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCg < 1:6412557/51‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCg < 1:6412556/51‑1 (MQ=255) acacTAAATCAGTAAGTTGGCAGCATCACCGGCGTgttgtt > 1:5227726/1‑41 (MQ=255) acacTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGt < 1:5235426/51‑1 (MQ=255) cacTAAATCAGTAAGTTGGCAGCATCACCGGCGTgttgtt > 1:852102/1‑40 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAg > 1:4072012/1‑51 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAgtg < 1:4289025/51‑1 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAgtg > 1:7079724/1‑51 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAgtgt < 1:6197218/51‑1 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAgtgt < 1:4711704/51‑1 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAgtgt < 1:3602752/51‑1 (MQ=255) aaTCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAgtgtg < 1:2616330/51‑1 (MQ=255) aaTCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAgtgtg < 1:3811590/51‑1 (MQ=255) aTCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTa > 1:1489984/1‑45 (MQ=255) tCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGtgtgtg > 1:4915146/1‑51 (MQ=255) cAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTgg < 1:7162354/51‑1 (MQ=255) cAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTgg > 1:4574644/1‑51 (MQ=255) cAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTgg > 1:6406063/1‑51 (MQ=255) cAGTAAGTTGGCAGCATCACCGGCATGTTGTTGCAACATCGTAgtgtgt < 1:1417358/49‑1 (MQ=255) aGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTgg > 1:820798/1‑50 (MQ=255) aGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGa > 1:6779851/1‑51 (MQ=255) aGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGa < 1:2679806/51‑1 (MQ=255) aGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGa < 1:3891068/51‑1 (MQ=255) tAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCg > 1:2779445/1‑38 (MQ=255) tAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGAtt < 1:2513142/51‑1 (MQ=255) tAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGAtt > 1:5825960/1‑51 (MQ=255) aaGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTg > 1:6541918/1‑51 (MQ=255) aaGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTg < 1:2983621/51‑1 (MQ=255) aGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTgt < 1:802013/51‑2 (MQ=255) aGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTgc < 1:2894564/51‑1 (MQ=255) aGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTgc < 1:1685274/51‑1 (MQ=255) aGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTgc < 1:1956521/51‑1 (MQ=255) gTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGt > 1:2417226/1‑36 (MQ=255) gTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTgcg < 1:6411792/51‑1 (MQ=255) ttGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGAtt > 1:3728644/1‑47 (MQ=255) tGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGcc > 1:5077496/1‑51 (MQ=255) agcaTCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTaga > 1:7157651/1‑51 (MQ=255) agcaTCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTaga < 1:6517297/51‑1 (MQ=255) gcaTCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTagag < 1:6985769/51‑1 (MQ=255) caTCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGc < 1:6342707/51‑1 (MQ=255) aTCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGct < 1:2036480/51‑1 (MQ=255) tCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGctt < 1:3751012/51‑1 (MQ=255) tCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGctt < 1:5272202/51‑1 (MQ=255) cACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGcttc > 1:5922035/1‑51 (MQ=255) cACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGctt > 1:3326775/1‑50 (MQ=255) aCCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGcttct > 1:6798938/1‑51 (MQ=255) aCCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGcttct < 1:6923883/51‑1 (MQ=255) ccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGcttctt < 1:5059649/51‑1 (MQ=255) cGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCttt < 1:4507043/51‑1 (MQ=255) | CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTT > REL606/4506062‑4506159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |