| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 4,415,710 | IS150 (–) +3 bp | 94.5% | coding (848‑850/1413 nt) | cycA → | D‑alanine/D‑serine/glycine transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 94 (0.990) | 55/80 | NT | 93.5% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 4415710 = | 6 (0.070) | coding (848/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter | |||||
| * | ? | REL606 | = 3894996 | NA (NA) | 111 (1.200) | 53/78 | NT | 94.5% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4415712 | 6 (0.070) | coding (850/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter | |||||
Only 100 of 127 total aligned reads displayed.
ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894950‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATA < REL606/4415712‑4415663 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAA < 1:4292011/51‑1ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAA < 1:2482721/51‑1ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAA > 1:8522063/1‑51 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAAC < 1:7336740/51‑1 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAAC > 1:8425431/1‑51 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACG < 1:5408308/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACG < 1:10915368/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACG < 1:1760711/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACG > 1:10637108/1‑51 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACG > 1:1980855/1‑51 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACG > 1:2626362/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG < 1:9411604/51‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG > 1:1723281/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG > 1:1501661/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG < 1:4204235/51‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG < 1:5018712/51‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG > 1:9073486/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG > 1:5657244/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG < 1:2234089/51‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG > 1:9637156/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGG > 1:4676139/1‑51 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGG < 1:6397229/51‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGC < 1:5097525/51‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTT < 1:7734101/51‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTT > 1:5875188/1‑51 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTT > 1:6650978/1‑51 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTT < 1:4988386/51‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTT > 1:6942108/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTC < 1:10128290/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTC > 1:7126451/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTC > 1:7631828/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTT > 1:9303442/1‑50 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTT < 1:3933976/49‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCT < 1:866359/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCC < 1:9331905/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGG < 1:545919/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGG > 1:8217072/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGG > 1:9017689/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGG > 1:9395767/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGG < 1:4740328/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGG > 1:5972730/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTC < 1:5462772/46‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTC < 1:4086696/46‑1 TAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGAC > 1:3904176/1‑51 ACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTA < 1:1343082/51‑1 CCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAA < 1:1819188/51‑1 CAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAAC < 1:4922298/51‑1 CAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAAC < 1:5722966/51‑1 CAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAAC > 1:700303/1‑51 CAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAAC > 1:4694932/1‑51 AACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACT < 1:52689/51‑1 ACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTC < 1:5330294/51‑1 ACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTC < 1:8598981/51‑1 ACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTC > 1:2497803/1‑51 ACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTC > 1:2946277/1‑51 ACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTC > 1:5919177/1‑51 CTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCC < 1:3519143/51‑1 TTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCA > 1:2960435/1‑51 TTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCA > 1:2692237/1‑51 TTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCA < 1:6774271/51‑1 TTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGG > 1:5921422/1‑36 TTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCAC > 1:5396305/1‑51 TTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCAC < 1:3004394/51‑1 TTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCAC > 1:6132263/1‑51 TTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG < 1:433328/51‑1 TTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG < 1:10224813/51‑1 TTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG > 1:177481/1‑51 TTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG < 1:678/51‑1 TTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG < 1:8523450/51‑1 TTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG > 1:5644514/1‑51 TTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTC > 1:32895/1‑46 TGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGC < 1:2116760/51‑1 TGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGC < 1:1092562/51‑1 TGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGC < 1:4162709/51‑1 TGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGC > 1:10763453/1‑51 TGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGC < 1:2836258/51‑1 GGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCG < 1:9829511/51‑1 GGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCG < 1:4717458/51‑1 GGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCG > 1:6185680/1‑51 GGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCG < 1:6654291/51‑1 GGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCG > 1:4960474/1‑51 GGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCG > 1:1435868/1‑51 GGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCG > 1:8152310/1‑51 GGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGT < 1:4428547/51‑1 GGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTC < 1:5790439/51‑1 GGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTC < 1:7091927/51‑1 TCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCA > 1:8074970/1‑50 TCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG > 1:9095834/1‑44 CAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACG > 1:6437857/1‑51 CAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACG > 1:10812145/1‑51 CAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACG > 1:6781835/1‑51 AGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGG < 1:4455749/51‑1 GTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGA < 1:10743260/51‑1 TACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGAC < 1:7372520/51‑1 TACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGAC > 1:96315/1‑51 TACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGAC < 1:2852090/51‑1 ACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACA > 1:2829685/1‑51 ACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACA < 1:3736119/51‑1 CACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACAT < 1:1674679/51‑1 ACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATA < 1:6096329/51‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894950‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATA < REL606/4415712‑4415663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |