Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,415,710 | IS150 (–) +3 bp | 94.5% | coding (848‑850/1413 nt) | cycA → | D‑alanine/D‑serine/glycine transporter |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3893554 = | NA (NA) | 94 (0.990) | 55/80 | NT | 93.5% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 4415710 = | 6 (0.070) | coding (848/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 111 (1.200) | 53/78 | NT | 94.5% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 4415712 | 6 (0.070) | coding (850/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter |
Only 100 of 125 total aligned reads displayed.
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893601‑3893554 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > REL606/4415710‑4415759 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:8399511/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:1872996/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:475518/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:7981828/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:1829456/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:5900866/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:846125/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:10838083/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:712536/51‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGT > 1:7657030/1‑51 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGT > 1:10861556/1‑51 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTT > 1:218506/1‑51 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTT > 1:701154/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTG < 1:8491235/51‑1 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTG < 1:8641402/51‑1 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTG > 1:8434245/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAAC > 1:1493731/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAAC < 1:8716783/51‑1 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAAC < 1:2369900/51‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACT < 1:8454500/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTG < 1:3629721/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTG < 1:9772706/51‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGT < 1:1521436/51‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGT > 1:8942593/1‑51 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGT > 1:1873981/1‑51 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT < 1:502952/51‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT < 1:2524145/51‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT < 1:8126288/51‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT > 1:7022859/1‑51 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTC > 1:9758787/1‑51 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTC > 1:3080595/1‑51 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCG < 1:10052844/51‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCG > 1:288059/1‑51 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCG < 1:6039236/51‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGT < 1:8476938/51‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTG > 1:6466047/1‑51 CCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTG > 1:9213171/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGT < 1:3414025/51‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGT > 1:6045790/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGT < 1:6685894/49‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTT > 1:6285778/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG > 1:7265925/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG > 1:4081904/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG < 1:10670034/51‑1 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG < 1:2948766/51‑1 CATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTA > 1:3079897/1‑51 CATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTA > 1:8597604/1‑51 TCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGG < 1:9832067/51‑1 CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG < 1:4951092/51‑1 CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG < 1:3335620/51‑1 CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG > 1:2588273/1‑51 GTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGac > 1:5408898/1‑49 TCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCT > 1:9098550/1‑51 TCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCT < 1:477255/51‑1 CCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTG < 1:7091499/51‑1 CCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTG > 1:10119437/1‑51 CCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTG > 1:3752562/1‑51 CAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGC < 1:417974/51‑1 AACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCC > 1:1287827/1‑51 ACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCT < 1:6771507/51‑1 CAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTG > 1:7994629/1‑51 AAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGC > 1:10893529/1‑51 AAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGC > 1:4193922/1‑51 AAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGC > 1:1006969/1‑51 AAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCT < 1:8134724/51‑1 AAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCT < 1:5837640/51‑1 AAATGGGTGCAGTACAATGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCT < 1:9338314/51‑1 AATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTG < 1:1274952/51‑1 AATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTG > 1:7638649/1‑51 ATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGC > 1:3842774/1‑51 TGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC < 1:5746875/51‑1 TGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC < 1:9417501/51‑1 TGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC > 1:1125767/1‑51 GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG > 1:4097955/1‑51 GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG < 1:5731531/51‑1 GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG < 1:6754873/51‑1 GGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGC < 1:4369537/51‑1 GGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGC < 1:6476915/51‑1 GTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCA < 1:7460908/51‑1 GTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCA < 1:1105861/51‑1 TGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAA < 1:8235643/51‑1 GCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAG < 1:9990705/51‑1 GCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAG < 1:3473925/51‑1 CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC < 1:7056622/51‑1 CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC < 1:1810576/51‑1 CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG > 1:6526445/1‑46 AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG < 1:3201310/51‑1 AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG > 1:3249387/1‑51 AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC > 1:9294243/1‑50 GTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGT > 1:10761447/1‑51 TACATTGTTGAACTGTTCGTGTTGGTAGGGTTGCCTGCTGCCGCAAGCGTG > 1:5802353/1‑51 TACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG < 1:4508527/51‑1 TACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG > 1:6425800/1‑51 TACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG > 1:8270640/1‑51 ACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGA > 1:9625978/1‑51 CATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGAT < 1:5339047/51‑1 CATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGAT < 1:7671436/51‑1 ATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > 1:6659936/1‑51 ATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC < 1:10382096/51‑1 ATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > 1:10090237/1‑51 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893601‑3893554 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > REL606/4415710‑4415759 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |