Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,415,710 IS150 (–) +3 bp 94.5% coding (848‑850/1413 nt) cycA → D‑alanine/D‑serine/glycine transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3893554 =NA (NA)94 (0.990) 55/80 NT 93.5% noncoding (1/1443 nt) IS150 repeat region
?REL606 4415710 = 6 (0.070)coding (848/1413 nt) cycA D‑alanine/D‑serine/glycine transporter
* ? REL606 = 3894996NA (NA)111 (1.200) 53/78 NT 94.5% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 4415712 6 (0.070)coding (850/1413 nt) cycA D‑alanine/D‑serine/glycine transporter

Only 100 of 125 total aligned reads displayed.

TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3893601‑3893554
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC  >  REL606/4415710‑4415759
                                                                                                  
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:8399511/51‑1
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:1872996/51‑1
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:475518/51‑1
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:7981828/51‑1
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:1829456/51‑1
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:5900866/51‑1
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:846125/51‑1
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:10838083/51‑1
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG                                                 <  1:712536/51‑1
 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGT                                                >  1:7657030/1‑51
 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGT                                                >  1:10861556/1‑51
  TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTT                                               >  1:218506/1‑51
  TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTT                                               >  1:701154/1‑51
   TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTG                                              <  1:8491235/51‑1
   TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTG                                              <  1:8641402/51‑1
   TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTG                                              >  1:8434245/1‑51
      GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAAC                                           >  1:1493731/1‑51
      GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAAC                                           <  1:8716783/51‑1
      GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAAC                                           <  1:2369900/51‑1
       GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACT                                          <  1:8454500/51‑1
        GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTG                                         <  1:3629721/51‑1
        GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTG                                         <  1:9772706/51‑1
         CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGT                                        <  1:1521436/51‑1
         CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGT                                        >  1:8942593/1‑51
         CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGT                                        >  1:1873981/1‑51
          TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT                                       <  1:502952/51‑1
          TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT                                       <  1:2524145/51‑1
          TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT                                       <  1:8126288/51‑1
          TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT                                       >  1:7022859/1‑51
           ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTC                                      >  1:9758787/1‑51
           ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTC                                      >  1:3080595/1‑51
            TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCG                                     <  1:10052844/51‑1
            TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCG                                     >  1:288059/1‑51
            TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCG                                     <  1:6039236/51‑1
             TCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGT                                    <  1:8476938/51‑1
              CCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTG                                   >  1:6466047/1‑51
              CCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTG                                   >  1:9213171/1‑51
               CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGT                                  <  1:3414025/51‑1
               CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGT                                  >  1:6045790/1‑51
               CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGT                                    <  1:6685894/49‑1
                ATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTT                                 >  1:6285778/1‑51
                  TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG                               >  1:7265925/1‑51
                  TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG                               >  1:4081904/1‑51
                  TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG                               <  1:10670034/51‑1
                  TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG                               <  1:2948766/51‑1
                    CATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTA                             >  1:3079897/1‑51
                    CATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTA                             >  1:8597604/1‑51
                      TCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGG                           <  1:9832067/51‑1
                       CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG                          <  1:4951092/51‑1
                       CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG                          <  1:3335620/51‑1
                       CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG                          >  1:2588273/1‑51
                        GTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGac                         >  1:5408898/1‑49
                         TCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCT                        >  1:9098550/1‑51
                         TCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCT                        <  1:477255/51‑1
                          CCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTG                       <  1:7091499/51‑1
                          CCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTG                       >  1:10119437/1‑51
                          CCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTG                       >  1:3752562/1‑51
                           CAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGC                      <  1:417974/51‑1
                            AACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCC                     >  1:1287827/1‑51
                             ACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCT                    <  1:6771507/51‑1
                              CAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTG                   >  1:7994629/1‑51
                               AAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGC                  >  1:10893529/1‑51
                               AAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGC                  >  1:4193922/1‑51
                               AAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGC                  >  1:1006969/1‑51
                                AAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCT                 <  1:8134724/51‑1
                                AAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCT                 <  1:5837640/51‑1
                                AAATGGGTGCAGTACAATGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCT                 <  1:9338314/51‑1
                                 AATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTG                <  1:1274952/51‑1
                                 AATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTG                >  1:7638649/1‑51
                                  ATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGC               >  1:3842774/1‑51
                                   TGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC              <  1:5746875/51‑1
                                   TGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC              <  1:9417501/51‑1
                                   TGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC              >  1:1125767/1‑51
                                    GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG             >  1:4097955/1‑51
                                    GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG             <  1:5731531/51‑1
                                    GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG             <  1:6754873/51‑1
                                     GGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGC            <  1:4369537/51‑1
                                     GGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGC            <  1:6476915/51‑1
                                      GTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCA           <  1:7460908/51‑1
                                      GTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCA           <  1:1105861/51‑1
                                       TGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAA          <  1:8235643/51‑1
                                        GCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAG         <  1:9990705/51‑1
                                        GCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAG         <  1:3473925/51‑1
                                         CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC        <  1:7056622/51‑1
                                         CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC        <  1:1810576/51‑1
                                         CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG             >  1:6526445/1‑46
                                          AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG       <  1:3201310/51‑1
                                          AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG       >  1:3249387/1‑51
                                          AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC        >  1:9294243/1‑50
                                           GTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGT      >  1:10761447/1‑51
                                            TACATTGTTGAACTGTTCGTGTTGGTAGGGTTGCCTGCTGCCGCAAGCGTG     >  1:5802353/1‑51
                                            TACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG     <  1:4508527/51‑1
                                            TACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG     >  1:6425800/1‑51
                                            TACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG     >  1:8270640/1‑51
                                             ACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGA    >  1:9625978/1‑51
                                              CATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGAT   <  1:5339047/51‑1
                                              CATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGAT   <  1:7671436/51‑1
                                               ATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC  >  1:6659936/1‑51
                                               ATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC  <  1:10382096/51‑1
                                               ATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC  >  1:10090237/1‑51
                                                                                                  
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3893601‑3893554
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC  >  REL606/4415710‑4415759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.