| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,522,900 | IS150 (–) +3 bp | 100% | coding (255‑257/2019 nt) | hyfB → | NADH dehydrogenase subunit N |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2522900 = | 0 (0.000) | 85 (0.900) | 49/80 | NT | 100% | coding (255/2019 nt) | hyfB | NADH dehydrogenase subunit N |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 2522902 | 0 (0.000) | 120 (1.260) | 60/80 | NT | 100% | coding (257/2019 nt) | hyfB | NADH dehydrogenase subunit N |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
Only 100 of 136 total aligned reads displayed.
TTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2522853‑2522902‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT < REL606/3894996‑3894948 TTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTT > 1:3073327/1‑51TTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTT > 1:336755/1‑51 TTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTG > 1:2068679/1‑51 TGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGT > 1:4353507/1‑51 GCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTA < 1:2744307/51‑1 CCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTAC > 1:3499663/1‑51 CGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACT < 1:3996496/51‑1 CGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTG > 1:545614/1‑47 GATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTG < 1:1577401/51‑1 GATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTG > 1:10358773/1‑51 GATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTG > 1:3505367/1‑51 GATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTG > 1:2007470/1‑51 GATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTG > 1:6791921/1‑51 ATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGA < 1:9287533/51‑1 TTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGAC > 1:9899188/1‑51 TTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACC > 1:8884857/1‑51 TTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACC > 1:1680484/1‑51 TTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACC > 1:8305853/1‑51 TTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACC > 1:3156584/1‑51 TAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCC > 1:3173375/1‑51 ACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCA > 1:5390249/1‑51 ACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCA > 1:6473295/1‑51 ACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCA < 1:10763569/51‑1 CCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAA > 1:4056966/1‑51 CCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAA < 1:10726093/51‑1 CCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAA < 1:1599044/51‑1 CCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAA > 1:1649916/1‑51 CCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAA > 1:4078276/1‑51 CCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAA > 1:758297/1‑51 CTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAA < 1:4685557/51‑1 CTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAA > 1:10938312/1‑51 CTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAA < 1:10386342/51‑1 CTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAA < 1:2556088/51‑1 TGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAA > 1:833787/1‑51 TGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAA > 1:9103781/1‑51 TGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAA > 1:6899198/1‑51 TGCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACCGACCCCAAAAA > 1:2877124/1‑51 GCGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAG < 1:6516389/51‑1 CGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGT > 1:3348009/1‑51 CGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGT > 1:3203195/1‑51 CGAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGT > 1:2582043/1‑51 GAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTT > 1:3982919/1‑51 GAATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTT > 1:5984841/1‑51 AATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTG > 1:6166157/1‑51 AATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTT > 1:268656/1‑50 ATGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGG > 1:9708507/1‑51 TGGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGA > 1:5042635/1‑51 GGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGAC > 1:2577471/1‑51 GGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGAC < 1:434636/51‑1 GGATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGAC > 1:1867255/1‑51 ATAGCCTCTCGGCATTTATGGTGCTTGTACTGCCCCCAAAAAGTTGGACAG < 1:4807228/51‑1 ATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAG > 1:8559705/1‑51 ATAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAG < 1:127994/51‑1 TAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGT < 1:3517205/51‑1 TAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGT > 1:3052690/1‑51 TAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGT < 1:8137952/51‑1 TAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGT < 1:8726381/51‑1 TAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGT > 1:10181724/1‑51 TAGCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGT < 1:5577925/51‑1 GCCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTA < 1:9648634/51‑1 CCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAA < 1:5359066/51‑1 CCTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAA > 1:8949354/1‑51 CTCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAA > 1:4464404/1‑51 TCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:9372432/51‑1 TCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:5537687/51‑1 TCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:2392670/51‑1 TCTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:1247033/51‑1 CTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:8546566/51‑1 CTCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:6854587/1‑51 TCGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACAC < 1:9352534/51‑1 CGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:3015353/51‑1 CGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:9840814/51‑1 CGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:6113356/51‑1 CGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAA > 1:2077276/1‑46 CGGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAA > 1:6652331/1‑46 GGCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA < 1:4199362/51‑1 GCATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG > 1:1541932/1‑51 CATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG > 1:785079/1‑51 CATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG > 1:10573680/1‑51 CATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG > 1:8882135/1‑51 CATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG < 1:2437276/51‑1 ATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC > 1:7614758/1‑51 ATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC > 1:7277536/1‑51 ATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC < 1:9083019/51‑1 ATTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC < 1:5031478/51‑1 TTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA > 1:588078/1‑51 TTTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA < 1:3944364/51‑1 TTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT < 1:7407758/51‑1 TTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT > 1:1381775/1‑51 TTATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT > 1:5347228/1‑51 TATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA > 1:4925815/1‑51 ATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:5821504/51‑1 ATGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT > 1:6344853/1‑51 TGGTGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA > 1:9738233/1‑51 TGCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:1887997/1‑49 aCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC > 1:10075173/2‑51 GCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC > 1:6723776/1‑51 GCTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC > 1:8304955/1‑51 CTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT < 1:10093054/51‑1 CTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT < 1:1890245/51‑1 TTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2522853‑2522902‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT < REL606/3894996‑3894948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |