Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,522,900 | IS150 (–) +3 bp | 100% | coding (255‑257/2019 nt) | hyfB → | NADH dehydrogenase subunit N |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2522900 = | 0 (0.000) | 85 (0.900) | 49/80 | NT | 100% | coding (255/2019 nt) | hyfB | NADH dehydrogenase subunit N |
? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 2522902 | 0 (0.000) | 120 (1.260) | 60/80 | NT | 100% | coding (257/2019 nt) | hyfB | NADH dehydrogenase subunit N |
? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 368 total aligned reads displayed.
TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG > REL606/3651041‑3651140 | tCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:4236656/51‑1 (MQ=255) cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg > 1:6540938/1‑51 (MQ=255) cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg > 1:2740074/1‑51 (MQ=255) cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg > 1:5345069/1‑51 (MQ=255) atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa < 1:4482765/51‑1 (MQ=255) atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa > 1:9524850/1‑51 (MQ=255) atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa > 1:9075302/1‑51 (MQ=255) atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa > 1:10287470/1‑51 (MQ=255) cgcgcagctgtaagcggatatccgcaggcattttccagccggggcTGTACt < 1:3469519‑M1/6‑1 (MQ=255) atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt < 1:6466118/51‑1 (MQ=255) atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt > 1:2022358/1‑51 (MQ=255) atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt > 1:1307992/1‑51 (MQ=255) atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt < 1:1982977/51‑1 (MQ=255) ttCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGc > 1:3235265/1‑51 (MQ=255) cgcagctgtaagcggatatccgcaggcattttccagccggggcTGTACTGc < 1:4654844‑M1/8‑1 (MQ=255) tCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCa < 1:7661716/51‑1 (MQ=255) tCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCa < 1:6047510/51‑1 (MQ=255) cTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCAc > 1:5202918/1‑51 (MQ=255) agctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCAcc < 1:8796346‑M1/11‑1 (MQ=255) gctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCAccc > 1:677876‑M1/40‑51 (MQ=255) gctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCAcc < 1:2533307‑M1/11‑1 (MQ=255) ctgtaagcggatatccgcaggcattttccagccggggcTGTTCTGCACCCa < 1:10008367‑M1/13‑1 (MQ=255) ctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCACCCa > 1:4906595‑M1/39‑51 (MQ=255) ggCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAt > 1:4712236/1‑51 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAtt > 1:4117322/1‑51 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAttt > 1:778002/1‑51 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAttt < 1:6643504/51‑1 (MQ=255) aagcggatatccgcaggcattttccagccggggcTGTACTGCACCCAtttt > 1:156689‑M1/35‑51 (MQ=255) aagcagatatccgcaggcattttccagccggggcTGTACTGCACCCAtttt > 1:5446230‑M1/35‑51 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAtttt > 1:3528851/1‑51 (MQ=255) gcggatatccgcaggcattttccagccggggcTGTACTGCACCCATTttgt > 1:375671‑M1/33‑51 (MQ=255) cggatatccgcaggcattttccagccggggcTGTACTGCACCCATTttgtt < 1:4376703‑M1/20‑1 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgtt > 1:9391531/1‑51 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgtt > 1:4976381/1‑51 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgttg < 1:4989963/51‑1 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgttg < 1:8782883/51‑1 (MQ=255) gatatccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTgg < 1:9579617‑M1/22‑1 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTgg > 1:8102412/1‑51 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTgg < 1:9269950/51‑1 (MQ=255) atatccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGa > 1:2875717‑M1/29‑51 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGa > 1:210958/1‑51 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGAc < 1:3981712/51‑1 (MQ=255) cctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACg < 1:5099589/51‑1 (MQ=255) atccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACg > 1:5631787‑M1/27‑51 (MQ=255) atccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACg > 1:8047244‑M1/27‑51 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGa > 1:6217511/1‑51 (MQ=255) cctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATg < 1:1493125/51‑1 (MQ=255) gcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGa > 1:10917537‑M1/23‑51 (MQ=255) ctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGa > 1:1759516/1‑51 (MQ=255) tgtgTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGaa < 1:4620083/51‑1 (MQ=255) caggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaa > 1:10025494‑M1/22‑51 (MQ=255) caggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaa < 1:138504‑M1/30‑1 (MQ=255) caggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaa < 1:10600122‑M1/30‑1 (MQ=255) aggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaaa > 1:1632562‑M1/21‑51 (MQ=255) ggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAAt < 1:2317060‑M1/32‑1 (MQ=255) gcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATg > 1:8904175‑M1/19‑51 (MQ=255) gcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATg > 1:8993779‑M1/19‑51 (MQ=255) tGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGa > 1:8759907/1‑51 (MQ=255) attttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGa < 1:5505767‑M1/35‑1 (MQ=255) attttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGa > 1:3649392‑M1/17‑51 (MQ=255) ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa > 1:2214157‑M1/16‑51 (MQ=255) ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa > 1:3777017‑M1/16‑51 (MQ=255) ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa > 1:6285992‑M1/16‑51 (MQ=255) gATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGaa < 1:8591196/51‑1 (MQ=255) gATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGaa < 1:7005795/51‑1 (MQ=255) tttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt < 1:3001960‑M1/37‑1 (MQ=255) aTTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt < 1:1122932/51‑1 (MQ=255) tttCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt < 1:5750029/50‑1 (MQ=255) ttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATa > 1:10823325‑M1/14‑51 (MQ=255) ttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATa < 1:7520403‑M1/38‑1 (MQ=255) tCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGc > 1:1039880/1‑51 (MQ=255) gccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcccc < 1:1452997‑M1/43‑1 (MQ=255) ccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt > 1:8669369‑M1/8‑51 (MQ=255) cGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa < 1:1871387/51‑1 (MQ=255) cGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa < 1:1543458/51‑1 (MQ=255) gAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTaa < 1:8226983/51‑1 (MQ=40) gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat < 1:3349068‑M1/47‑1 (MQ=255) gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat > 1:7256338‑M1/5‑51 (MQ=255) gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat < 1:3420789‑M1/47‑1 (MQ=255) gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat > 1:2956317‑M1/5‑51 (MQ=255) gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat < 1:3867341‑M1/47‑1 (MQ=255) aGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat < 1:8257791/51‑1 (MQ=38) ggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata < 1:8495038‑M1/48‑1 (MQ=255) ggcTATACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata < 1:6355815‑M1/48‑1 (MQ=255) tATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat < 1:614935/51‑1 (MQ=33) tATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat < 1:6866189/51‑1 (MQ=33) gcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat > 1:4591337‑M1/3‑51 (MQ=255) gcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat > 1:1256509‑M1/3‑51 (MQ=255) gcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat > 1:10752046‑M1/3‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:1176783‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:2489831‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:5936756‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:5882123‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:5804992‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:7468835‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:3172997‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:10548067‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:3728344‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:4450811‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:9696263‑M1/2‑51 (MQ=255) | TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG > REL606/3651041‑3651140 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |