Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 2,522,900 IS150 (–) +3 bp 100% coding (255‑257/2019 nt) hyfB → NADH dehydrogenase subunit N

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2522900 =0 (0.000)85 (0.900) 49/80 NT 100% coding (255/2019 nt) hyfB NADH dehydrogenase subunit N
?REL606 3651091 = NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 = 25229020 (0.000)120 (1.260) 60/80 NT 100% coding (257/2019 nt) hyfB NADH dehydrogenase subunit N
?REL606 = 3894996 NA (NA)noncoding (1443/1443 nt) IS150 repeat region

Only 100 of 368 total aligned reads displayed.

TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG  >  REL606/3651041‑3651140
                                                  |                                                 
tCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt                                                   <  1:4236656/51‑1 (MQ=255)
 cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg                                                  >  1:6540938/1‑51 (MQ=255)
 cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg                                                  >  1:2740074/1‑51 (MQ=255)
 cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg                                                  >  1:5345069/1‑51 (MQ=255)
   atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa                                                <  1:4482765/51‑1 (MQ=255)
   atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa                                                >  1:9524850/1‑51 (MQ=255)
   atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa                                                >  1:9075302/1‑51 (MQ=255)
   atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa                                                >  1:10287470/1‑51 (MQ=255)
     cgcgcagctgtaagcggatatccgcaggcattttccagccggggcTGTACt                                              <  1:3469519‑M1/6‑1 (MQ=255)
     atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt                                              <  1:6466118/51‑1 (MQ=255)
     atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt                                              >  1:2022358/1‑51 (MQ=255)
     atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt                                              >  1:1307992/1‑51 (MQ=255)
     atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt                                              <  1:1982977/51‑1 (MQ=255)
       ttCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGc                                            >  1:3235265/1‑51 (MQ=255)
       cgcagctgtaagcggatatccgcaggcattttccagccggggcTGTACTGc                                            <  1:4654844‑M1/8‑1 (MQ=255)
        tCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCa                                           <  1:7661716/51‑1 (MQ=255)
        tCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCa                                           <  1:6047510/51‑1 (MQ=255)
         cTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCAc                                          >  1:5202918/1‑51 (MQ=255)
          agctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCAcc                                         <  1:8796346‑M1/11‑1 (MQ=255)
           gctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCAccc                                        >  1:677876‑M1/40‑51 (MQ=255)
           gctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCAcc                                         <  1:2533307‑M1/11‑1 (MQ=255)
            ctgtaagcggatatccgcaggcattttccagccggggcTGTTCTGCACCCa                                       <  1:10008367‑M1/13‑1 (MQ=255)
            ctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCACCCa                                       >  1:4906595‑M1/39‑51 (MQ=255)
             ggCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAt                                      >  1:4712236/1‑51 (MQ=255)
              gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAtt                                     >  1:4117322/1‑51 (MQ=255)
               cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAttt                                    >  1:778002/1‑51 (MQ=255)
               cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAttt                                    <  1:6643504/51‑1 (MQ=255)
                aagcggatatccgcaggcattttccagccggggcTGTACTGCACCCAtttt                                   >  1:156689‑M1/35‑51 (MQ=255)
                aagcagatatccgcaggcattttccagccggggcTGTACTGCACCCAtttt                                   >  1:5446230‑M1/35‑51 (MQ=255)
                aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAtttt                                   >  1:3528851/1‑51 (MQ=255)
                  gcggatatccgcaggcattttccagccggggcTGTACTGCACCCATTttgt                                 >  1:375671‑M1/33‑51 (MQ=255)
                   cggatatccgcaggcattttccagccggggcTGTACTGCACCCATTttgtt                                <  1:4376703‑M1/20‑1 (MQ=255)
                   cccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgtt                                >  1:9391531/1‑51 (MQ=255)
                   cccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgtt                                >  1:4976381/1‑51 (MQ=255)
                    ccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgttg                               <  1:4989963/51‑1 (MQ=255)
                    ccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgttg                               <  1:8782883/51‑1 (MQ=255)
                     gatatccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTgg                              <  1:9579617‑M1/22‑1 (MQ=255)
                     cAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTgg                              >  1:8102412/1‑51 (MQ=255)
                     cAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTgg                              <  1:9269950/51‑1 (MQ=255)
                      atatccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGa                             >  1:2875717‑M1/29‑51 (MQ=255)
                      aGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGa                             >  1:210958/1‑51 (MQ=255)
                       gCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGAc                            <  1:3981712/51‑1 (MQ=255)
                        cctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACg                           <  1:5099589/51‑1 (MQ=255)
                        atccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACg                           >  1:5631787‑M1/27‑51 (MQ=255)
                        atccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACg                           >  1:8047244‑M1/27‑51 (MQ=255)
                         ctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGa                          >  1:6217511/1‑51 (MQ=255)
                           cctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATg                        <  1:1493125/51‑1 (MQ=255)
                            gcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGa                       >  1:10917537‑M1/23‑51 (MQ=255)
                            ctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGa                       >  1:1759516/1‑51 (MQ=255)
                             tgtgTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGaa                      <  1:4620083/51‑1 (MQ=255)
                             caggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaa                      >  1:10025494‑M1/22‑51 (MQ=255)
                             caggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaa                      <  1:138504‑M1/30‑1 (MQ=255)
                             caggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaa                      <  1:10600122‑M1/30‑1 (MQ=255)
                              aggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaaa                     >  1:1632562‑M1/21‑51 (MQ=255)
                               ggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAAt                    <  1:2317060‑M1/32‑1 (MQ=255)
                                gcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATg                   >  1:8904175‑M1/19‑51 (MQ=255)
                                gcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATg                   >  1:8993779‑M1/19‑51 (MQ=255)
                                  tGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGa                 >  1:8759907/1‑51 (MQ=255)
                                  attttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGa                 <  1:5505767‑M1/35‑1 (MQ=255)
                                  attttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGa                 >  1:3649392‑M1/17‑51 (MQ=255)
                                   ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa                >  1:2214157‑M1/16‑51 (MQ=255)
                                   ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa                >  1:3777017‑M1/16‑51 (MQ=255)
                                   ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa                >  1:6285992‑M1/16‑51 (MQ=255)
                                   gATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGaa                <  1:8591196/51‑1 (MQ=255)
                                   gATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGaa                <  1:7005795/51‑1 (MQ=255)
                                    tttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt               <  1:3001960‑M1/37‑1 (MQ=255)
                                    aTTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt               <  1:1122932/51‑1 (MQ=255)
                                     tttCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt               <  1:5750029/50‑1 (MQ=255)
                                     ttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATa              >  1:10823325‑M1/14‑51 (MQ=255)
                                     ttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATa              <  1:7520403‑M1/38‑1 (MQ=255)
                                       tCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGc            >  1:1039880/1‑51 (MQ=255)
                                          gccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcccc         <  1:1452997‑M1/43‑1 (MQ=255)
                                           ccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt        >  1:8669369‑M1/8‑51 (MQ=255)
                                            cGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa       <  1:1871387/51‑1 (MQ=255)
                                            cGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa       <  1:1543458/51‑1 (MQ=255)
                                             gAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTaa      <  1:8226983/51‑1 (MQ=40)
                                              gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat     <  1:3349068‑M1/47‑1 (MQ=255)
                                              gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat     >  1:7256338‑M1/5‑51 (MQ=255)
                                              gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat     <  1:3420789‑M1/47‑1 (MQ=255)
                                              gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat     >  1:2956317‑M1/5‑51 (MQ=255)
                                              gggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat     <  1:3867341‑M1/47‑1 (MQ=255)
                                              aGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat     <  1:8257791/51‑1 (MQ=38)
                                               ggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata    <  1:8495038‑M1/48‑1 (MQ=255)
                                               ggcTATACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata    <  1:6355815‑M1/48‑1 (MQ=255)
                                                tATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat   <  1:614935/51‑1 (MQ=33)
                                                tATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat   <  1:6866189/51‑1 (MQ=33)
                                                gcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat   >  1:4591337‑M1/3‑51 (MQ=255)
                                                gcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat   >  1:1256509‑M1/3‑51 (MQ=255)
                                                gcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat   >  1:10752046‑M1/3‑51 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  >  1:1176783‑M1/2‑51 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  >  1:2489831‑M1/2‑51 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  <  1:5936756‑M1/50‑1 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  <  1:5882123‑M1/50‑1 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  >  1:5804992‑M1/2‑51 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  >  1:7468835‑M1/2‑51 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  <  1:3172997‑M1/50‑1 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  >  1:10548067‑M1/2‑51 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  <  1:3728344‑M1/50‑1 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  <  1:4450811‑M1/50‑1 (MQ=255)
                                                 cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg  >  1:9696263‑M1/2‑51 (MQ=255)
                                                  |                                                 
TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG  >  REL606/3651041‑3651140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.