Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 2,522,900 IS150 (–) +3 bp 100% coding (255‑257/2019 nt) hyfB → NADH dehydrogenase subunit N

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2522900 =0 (0.000)85 (0.900) 49/80 NT 100% coding (255/2019 nt) hyfB NADH dehydrogenase subunit N
?REL606 3651091 = NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 = 25229020 (0.000)120 (1.260) 60/80 NT 100% coding (257/2019 nt) hyfB NADH dehydrogenase subunit N
?REL606 = 3894996 NA (NA)noncoding (1443/1443 nt) IS150 repeat region

GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAC  >  REL606/3894949‑3894999
                                               |   
gACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc  <  1:1768627/51‑1 (MQ=35)
                                               |   
GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAC  >  REL606/3894949‑3894999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.