Predicted mutation
evidence seq id position mutation annotation gene description
MC JC REL606 3,894,997 Δ6,934 bp IS150‑mediated rbsD–[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 3893578–3894995 3901930 6936–8353 16 [14] [1] 40 insJ‑5–[yieO] insJ‑5, insK‑5, rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? REL606 = 3894996NA (NA)34 (0.680) 23/64 0.8 noncoding (1443/1443 nt) IS150 repeat region
?REL606 3901931 = 1 (0.020)coding (489/1428 nt) yieO predicted multidrug or homocysteine efflux system

GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAG...................................  >  REL606/3894963‑3894996
................................CAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  REL606/3901931‑3901966
                                                                      
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGG                                    <  1:3831686/36‑1 (MQ=35)
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGG                                    <  1:6955034/36‑1 (MQ=35)
 ttTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGT                                   <  1:4247111/34‑1 (MQ=255)
     TAACTGTCCAACTTTTTGGGGTCGGTACAGGTTGCC                               <  1:5130190/36‑1 (MQ=255)
      AACTGTCCAACTTTTTGGGGTCAGTACAGGTTGCCC                              >  1:3926955/1‑36 (MQ=255)
      AACTGTCCAACTTTTTGGGGTCAGTACAGGTTGCCC                              >  1:7481372/1‑36 (MQ=255)
      AACTGTCCAACTTTTTGCGGTCAGTACAGGTTGCCC                              >  1:4034641/1‑36 (MQ=255)
       ACTGTCCAACTTTTTGGGGTCAGTACAGGTTGCCCA                             <  1:1658625/36‑1 (MQ=255)
           TCCAACTTTTTGGGGTCAGTACAGGTTGCCCAGGTG                         <  1:2228018/36‑1 (MQ=255)
            CCAACTTTTTGGGGTCAGTACAGGTTGCCCAGGTGA                        >  1:6447153/1‑36 (MQ=255)
              AACTTTTTGGGGTCAGTACAGGTTGCCCCGGTGACC                      >  1:3417914/1‑36 (MQ=255)
               ACTTTTTGGGGTCAGTACAGGTTGCCCAGGTGACCA                     >  1:2205068/1‑36 (MQ=255)
                CTTTTTGGGGTCAGTACAGGTTGCCCAGGTGACCAG                    <  1:203217/36‑1 (MQ=255)
                CTTTTTGGGGTCAGTACAGGTTGCCCAGGTGACCAG                    <  1:2242740/36‑1 (MQ=255)
                  TTTTGGGGTCAGTACAGGTTGCCCAGGTGACCAGCA                  >  1:2638320/1‑36 (MQ=255)
                  TTTTGGGGTCAGTACAGGTTGCCCAGGAGACCAGCA                  >  1:3329157/1‑36 (MQ=255)
                   TTTGGGGTCAGTACAGGTTGCCCAGGTGACCAGCAC                 >  1:2738077/1‑36 (MQ=255)
                    TTGGGGTCAGTATAGGTTGCCCAGGTGACCAGCACG                >  1:7456912/1‑36 (MQ=255)
                    TTGGGGTCAGTACAGGTTGCCCAGGTGACCCGCACG                >  1:5447161/1‑36 (MQ=255)
                    TTGGGGTCAGTACAGGTTGCCCAGGTGACCCGCACG                >  1:5293304/1‑36 (MQ=255)
                     TGGGGTCAGTACAGGTTGCCCAGGTGACCAGCACGC               >  1:5677896/1‑36 (MQ=255)
                      GGGGTCAGTACAGGTTGCCCAGGTGACCAGCACGCC              <  1:2078368/36‑1 (MQ=255)
                      GGGGTCAGTACAGGTTGCCCAGGTGACCAGCACGCC              <  1:1266118/36‑1 (MQ=255)
                      GGGGTCAGTACAGGTTGCCCAGGTGACCAGCACGCC              <  1:768231/36‑1 (MQ=255)
                       GGGTCAGTACAGGTTGCCCAGGTGACCAGCACGCCG             >  1:1498292/1‑36 (MQ=255)
                         GTCAGTACAGGTTGCCCAGGTGACCAGCACGCAGCC           >  1:2400219/1‑36 (MQ=255)
                          TCAGTACAGGTTGCCCAGGTGACCAGCACGCCGCCA          >  1:5588095/1‑36 (MQ=255)
                          TCAGTACAGGTTGCCCAGGTGACCAGCACGCCGCCA          <  1:1217590/36‑1 (MQ=255)
                            AGTACAGGTTGCCCAGGTGACCAGCACGCCGCCAAG        <  1:4928452/36‑1 (MQ=255)
                            AGTACAGGTTGCCCAGGTGACCAGCACGCCGCCAAG        >  1:1819558/1‑36 (MQ=255)
                              TACAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAA      <  1:2226448/36‑1 (MQ=255)
                               ACAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAAC     <  1:404236/36‑1 (MQ=255)
                               ACAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAAC     >  1:7459675/1‑36 (MQ=255)
                               ACAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAAC     <  1:1221608/36‑1 (MQ=255)
                                CAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACG    >  1:3403329/1‑36 (MQ=255)
                                CAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACG    >  1:947199/1‑36 (MQ=255)
                                  GGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  1:4434522/1‑36 (MQ=255)
                                  GGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  <  1:6316423/36‑1 (MQ=255)
                                  GGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  1:776216/1‑36 (MQ=255)
                                                                      
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAG...................................  >  REL606/3894963‑3894996
................................CAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  REL606/3901931‑3901966

Base quality scores:  ATCG  < 3 ≤  ATCG  < 11 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 32 ≤  ATCG