| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 4,462,655 | IS1 (+) +9 bp | 100% | intergenic (‑85/‑100) | yjgM ← / → yjgN | predicted acetyltransferase/conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4462655 = | 0 (0.000) | 114 (1.200) | 63/80 | NT | 100% | intergenic (‑85/‑108) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | 4521571 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 4462663 | 0 (0.000) | 95 (1.030) | 48/78 | NT | 100% | intergenic (‑93/‑100) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | = 4506109 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
Only 100 of 123 total aligned reads displayed.
TTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC > REL606/4521521‑4521618 | ttACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCgg > 1:5787671/1‑51 (MQ=255)ttACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCgg > 1:3205253/1‑51 (MQ=255)ttACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCgg > 1:9137682/1‑51 (MQ=255) tACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCggg > 1:9806992/1‑51 (MQ=255) aCGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGt > 1:1089884/1‑51 (MQ=255) aCGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGt > 1:5155880/1‑51 (MQ=255) aCGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGt < 1:10386401/51‑1 (MQ=255) gCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCggg > 1:10147998/1‑48 (MQ=255) gCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTaa < 1:1320403/51‑1 (MQ=255) ccATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAAt > 1:10940641/1‑51 (MQ=255) cATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATg > 1:6960556/1‑51 (MQ=255) cATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATg < 1:5504871/51‑1 (MQ=255) cATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATg < 1:2721235/51‑1 (MQ=255) aTTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGa > 1:4626729/1‑51 (MQ=255) ttCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAAt > 1:5457054/1‑48 (MQ=255) ttCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGAc < 1:3812770/51‑1 (MQ=255) cGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTc > 1:3566380/1‑51 (MQ=255) gtgtGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTcc < 1:6814742/51‑1 (MQ=255) tgtgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCa < 1:7553051/51‑1 (MQ=255) gtgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCaa > 1:5982063/1‑51 (MQ=255) gtgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCaa < 1:1945626/51‑1 (MQ=255) gtgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCaa > 1:10714790/1‑51 (MQ=255) gtgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCaa < 1:10019586/51‑1 (MQ=255) gtgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCaa > 1:3648469/1‑51 (MQ=255) gtgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCaa > 1:9548032/1‑51 (MQ=255) tgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAAc < 1:8007414/51‑1 (MQ=255) tgGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAAc > 1:4607296/1‑51 (MQ=255) ggTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACt > 1:2665696/1‑51 (MQ=255) ggTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACt > 1:8232724/1‑51 (MQ=255) ggTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACt > 1:10018215/1‑51 (MQ=255) gTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACtt < 1:8588308/51‑1 (MQ=255) ttttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTa < 1:3610894/51‑1 (MQ=255) ttttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTa > 1:4872232/1‑51 (MQ=255) tttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTa > 1:3546245/1‑50 (MQ=255) tttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAt > 1:1382692/1‑51 (MQ=255) tttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAt > 1:3034022/1‑51 (MQ=255) tttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAt > 1:1757545/1‑51 (MQ=255) tttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAt > 1:1194810/1‑51 (MQ=255) tttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAt < 1:2191543/51‑1 (MQ=255) tttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAt > 1:7072587/1‑51 (MQ=255) tttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAt > 1:3879253/1‑51 (MQ=255) ttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAtt < 1:8061030/51‑1 (MQ=255) ttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAtt < 1:3841879/51‑1 (MQ=255) ttGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTAtt < 1:2187981/51‑1 (MQ=255) tGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTg < 1:2681106/51‑1 (MQ=255) tGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTg > 1:8675364/1‑51 (MQ=255) tGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTg < 1:1821009/51‑1 (MQ=255) gCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGa < 1:9346870/51‑1 (MQ=255) gCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGa > 1:6109907/1‑51 (MQ=255) gCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGa < 1:8870151/51‑1 (MQ=255) cTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGAt < 1:6265500/51‑1 (MQ=255) tttGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATa < 1:5290368/51‑1 (MQ=255) tttGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATa < 1:4480405/51‑1 (MQ=255) tttGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATa < 1:8521313/51‑1 (MQ=255) ttGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAg > 1:1229706/1‑51 (MQ=255) tGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAgt < 1:6269763/51‑1 (MQ=255) ggCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAgtg > 1:5235532/1‑51 (MQ=255) cGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGtt < 1:6688807/51‑1 (MQ=255) cGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGtt > 1:7480792/1‑51 (MQ=255) gAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGttt < 1:7472946/51‑1 (MQ=255) gAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGttt > 1:10065380/1‑51 (MQ=255) aaTATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATCGTGtttt > 1:4084794/1‑51 (MQ=255) aaTATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGtttt < 1:2061588/51‑1 (MQ=255) aaTATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGtttt < 1:2702638/51‑1 (MQ=255) atatGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTa < 1:5365383/51‑1 (MQ=255) atatGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTa < 1:146804/51‑1 (MQ=255) atatGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTa < 1:298913/51‑1 (MQ=255) atatGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTa < 1:8587309/51‑1 (MQ=255) atatGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTa < 1:5746653/51‑1 (MQ=255) tatGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTAt > 1:9878996/1‑51 (MQ=255) tatGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTAt < 1:4339750/51‑1 (MQ=255) tatGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTAt < 1:6369102/51‑1 (MQ=255) tGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGt > 1:9905868/1‑51 (MQ=255) tGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGt < 1:10169811/51‑1 (MQ=255) gggAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt > 1:10209755/1‑51 (MQ=255) gggAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt > 1:7782428/1‑51 (MQ=255) gggAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt > 1:7366474/1‑51 (MQ=255) gAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa < 1:4803796/51‑1 (MQ=255) gAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa > 1:6683914/1‑51 (MQ=255) aTAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa < 1:1979570/51‑1 (MQ=255) aTAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa > 1:5515004/1‑51 (MQ=255) aTAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa < 1:2992947/51‑1 (MQ=255) tAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt > 1:10234292/1‑51 (MQ=255) tAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt > 1:3375957/1‑51 (MQ=255) tAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt < 1:2313373/51‑1 (MQ=255) acaTACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATa > 1:8229620/3‑51 (MQ=255) aGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATa > 1:6420517/1‑51 (MQ=255) aGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATa < 1:3133003/51‑1 (MQ=255) aTACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt > 1:7211511/1‑51 (MQ=255) aTACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt > 1:5889020/1‑51 (MQ=255) aTACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt < 1:6967576/51‑1 (MQ=255) aTACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt < 1:9488216/51‑1 (MQ=255) tACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATg > 1:1331512/1‑51 (MQ=40) tACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATg < 1:2387325/51‑1 (MQ=40) tACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATg < 1:6710173/51‑1 (MQ=40) aCGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc < 1:9467789/51‑1 (MQ=38) aCGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc > 1:5158726/1‑51 (MQ=38) aCGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc < 1:4890409/51‑1 (MQ=38) cgcgGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGcc > 1:10294790/1‑51 (MQ=35) gcgGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGccc > 1:4089964/1‑51 (MQ=33) | TTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC > REL606/4521521‑4521618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |