| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 4,462,655 | IS1 (+) +9 bp | 100% | intergenic (‑85/‑100) | yjgM ← / → yjgN | predicted acetyltransferase/conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4462655 = | 0 (0.000) | 114 (1.200) | 63/80 | NT | 100% | intergenic (‑85/‑108) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | 4521571 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 4462663 | 0 (0.000) | 95 (1.030) | 48/78 | NT | 100% | intergenic (‑93/‑100) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | = 4506109 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
Only 100 of 282 total aligned reads displayed.
TTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACA > REL606/4462605‑4462705 | tcgggcattatctgaacataaaacactatcaataagttggagtcattacca < 1:241958‑M1/1‑1 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca > 1:4015018‑M1/51‑51 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca > 1:3512157‑M1/51‑51 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca > 1:6289906‑M1/51‑51 (MQ=255)tcgggcattatctgaacataaaacactatcaataagttggagtcattacca > 1:5587636‑M1/51‑51 (MQ=255) tGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATat < 1:2855113/51‑2 (MQ=255) tGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATaa > 1:1881861/1‑51 (MQ=255) tGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATaa < 1:8253332/51‑1 (MQ=255) tGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATaa < 1:1236569/51‑1 (MQ=255) cgggcattatctgaacataaaacactatcaataagttggagtcattaccaa < 1:6103854‑M1/2‑1 (MQ=255) cgggcattatctgaacataaaacactatcaataagttggagtcattaccaa > 1:5849390‑M1/50‑51 (MQ=255) cgggcattatctgaacataaaacactatcaataagttggagtcattaccaa < 1:8830212‑M1/2‑1 (MQ=255) cgggcattatctgaacataaaacactatcaataagttggagtcattaccaa < 1:270133‑M1/2‑1 (MQ=255) gTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATaaa > 1:133885/1‑51 (MQ=255) tttAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAg > 1:7282649/1‑51 (MQ=255) ggcattatctgaacataaaacactatcaataagttggagtcattaccAAAg < 1:1033056‑M1/4‑1 (MQ=255) tAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGtt > 1:913198/1‑51 (MQ=255) aaTACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGttt < 1:3553150/51‑1 (MQ=255) aaTACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGttt > 1:5764584/1‑51 (MQ=255) aaTACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGttt < 1:9649009/51‑1 (MQ=255) aTACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGtttt > 1:5983725/1‑51 (MQ=255) tACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGttttt < 1:7732777/51‑1 (MQ=255) aCCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTg < 1:1570660‑M1/51‑2 (MQ=255) tctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGc < 1:10207098‑M1/11‑1 (MQ=255) ccACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTgg > 1:9408722‑M1/1‑49 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCa > 1:10478134‑M1/39‑51 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCa > 1:8981888‑M1/39‑51 (MQ=255) ctctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtga > 1:7457530‑M1/1‑46 (MQ=255) ctctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtga > 1:9688361‑M1/1‑46 (MQ=255) aacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:2274971‑M1/15‑1 (MQ=255) aacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:954134‑M1/15‑1 (MQ=255) aacataaaaaactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:3907193‑M1/15‑1 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg > 1:6214724‑M1/1‑44 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg < 1:9026616‑M1/51‑8 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg > 1:1627729‑M1/1‑44 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg < 1:1783507‑M1/51‑8 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa > 1:4835066‑M1/34‑51 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa < 1:10584953‑M1/18‑1 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa < 1:8176164‑M1/18‑1 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa < 1:10078550‑M1/18‑1 (MQ=255) ttcttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctg > 1:3646603‑M1/1‑41 (MQ=255) ttcttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctg > 1:146041‑M1/1‑41 (MQ=255) ttcttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctg < 1:9280364‑M1/51‑11 (MQ=255) taaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAt < 1:6376854‑M1/19‑1 (MQ=255) aaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAtt < 1:6675000‑M1/20‑1 (MQ=255) aaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAtt > 1:7393290‑M1/32‑51 (MQ=255) aaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTa > 1:6334785‑M1/31‑51 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca < 1:7999427‑M1/51‑14 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca > 1:7110907‑M1/1‑38 (MQ=255) aacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTAc < 1:9462338‑M1/22‑1 (MQ=255) aacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTAc > 1:413763‑M1/30‑51 (MQ=255) tACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaa < 1:6501891‑M1/51‑15 (MQ=255) tACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaa < 1:4248604‑M1/51‑15 (MQ=255) aCGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaac > 1:5787385‑M1/1‑36 (MQ=255) actatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGa < 1:2330677‑M1/25‑1 (MQ=255) gTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaactt > 1:7932634‑M1/1‑34 (MQ=255) tatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATa > 1:4864169‑M1/25‑51 (MQ=255) gcgcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttac > 1:2637558‑M1/1‑32 (MQ=255) atcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACt > 1:9874798‑M1/24‑46 (MQ=255) atcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATaa > 1:8473209‑M1/24‑51 (MQ=255) tcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAag < 1:3162970‑M1/29‑1 (MQ=255) cgcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttact < 1:7613228‑M1/51‑21 (MQ=255) gcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactg > 1:5386413‑M1/1‑30 (MQ=255) caataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga < 1:10654523‑M1/30‑1 (MQ=255) caataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga > 1:6821125‑M1/22‑51 (MQ=255) aataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAagag < 1:5452440‑M1/31‑1 (MQ=255) aataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga > 1:875977‑M1/21‑50 (MQ=255) aaGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgat > 1:1185411‑M1/1‑28 (MQ=255) aaGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgat > 1:8839609‑M1/1‑28 (MQ=255) taagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTa < 1:8312871‑M1/33‑1 (MQ=255) gCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattt < 1:199813‑M1/51‑26 (MQ=255) aagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTAt > 1:7196524‑M1/18‑51 (MQ=255) cATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattta < 1:2492321‑M1/51‑27 (MQ=255) tCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagt < 1:5241355‑M1/51‑29 (MQ=255) tCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagt > 1:7830716‑M1/1‑23 (MQ=255) tggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTa > 1:3389805‑M1/14‑51 (MQ=255) ttATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgt > 1:3747448‑M1/1‑21 (MQ=255) ttATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgt > 1:10727346‑M1/1‑21 (MQ=255) tataAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgt > 1:3827313‑M1/1‑20 (MQ=255) gagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAAc > 1:10398863‑M1/12‑51 (MQ=255) agtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACg > 1:4630366‑M1/11‑51 (MQ=255) agtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACg < 1:2229173‑M1/41‑1 (MQ=255) taAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatg > 1:5929239‑M1/1‑18 (MQ=255) gtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGt < 1:4396962‑M1/42‑1 (MQ=255) tcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTg > 1:8421470‑M1/9‑51 (MQ=255) tcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTg < 1:10875060‑M1/43‑1 (MQ=255) attaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGc < 1:4932476‑M1/45‑1 (MQ=255) ttaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCa > 1:6129170‑M1/6‑51 (MQ=255) ttaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCa > 1:210915‑M1/6‑51 (MQ=255) taccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAg > 1:4755748‑M1/5‑51 (MQ=255) taccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAg < 1:297476‑M1/47‑1 (MQ=255) taccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAg < 1:10798941‑M1/47‑1 (MQ=255) aaTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtg < 1:1419649‑M1/51‑40 (MQ=255) aaTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtg < 1:10015141‑M1/51‑40 (MQ=255) ccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGaa < 1:8712837‑M1/49‑1 (MQ=255) aTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgt > 1:5663390‑M1/1‑11 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:854295‑M1/1‑10 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:7004349‑M1/1‑10 (MQ=255) aaaGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgttt > 1:3209237‑M1/1‑9 (MQ=255) aaaGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACa > 1:868850/1‑51 (MQ=255) | TTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACA > REL606/4462605‑4462705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |