| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 4,462,655 | IS1 (+) +9 bp | 100% | intergenic (‑85/‑100) | yjgM ← / → yjgN | predicted acetyltransferase/conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4462655 = | 0 (0.000) | 114 (1.200) | 63/80 | NT | 100% | intergenic (‑85/‑108) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | 4521571 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 4462663 | 0 (0.000) | 95 (1.030) | 48/78 | NT | 100% | intergenic (‑93/‑100) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
| ? | REL606 | = 4506109 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
Only 100 of 286 total aligned reads displayed.
TACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTG > REL606/4462613‑4462713 | tctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGc < 1:5770038‑M1/11‑1 (MQ=255) tctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGc > 1:10658402‑M1/41‑51 (MQ=255) tctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGc < 1:10207098‑M1/11‑1 (MQ=255) ctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGcc > 1:7393715‑M1/40‑51 (MQ=255) ctgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGcc < 1:5790901‑M1/12‑1 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCa > 1:8981888‑M1/39‑51 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCa > 1:10478134‑M1/39‑51 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCa > 1:3168882‑M1/39‑51 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCa > 1:629471‑M1/39‑51 (MQ=255) gaacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAg > 1:5599020‑M1/38‑51 (MQ=255) ctctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtga > 1:3622655‑M1/1‑46 (MQ=255) aacataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:1207433‑M1/15‑1 (MQ=255) aacataaaaaactatcaataagttggagtcattaccAAAGTTTTTGCCAGc < 1:3907193‑M1/15‑1 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg < 1:4844010‑M1/51‑8 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg > 1:3533034‑M1/1‑44 (MQ=255) ctctTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatg > 1:1627729‑M1/1‑44 (MQ=255) cataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCt > 1:7774574‑M1/35‑51 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa < 1:8176164‑M1/18‑1 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa < 1:8005639‑M1/18‑1 (MQ=255) ataaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTa < 1:10584953‑M1/18‑1 (MQ=255) ttcttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctg > 1:146041‑M1/1‑41 (MQ=255) taaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAt < 1:3806956‑M1/19‑1 (MQ=255) tcttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgc < 1:7369030‑M1/51‑12 (MQ=255) aaaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTAtt > 1:7083067‑M1/32‑51 (MQ=255) cttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcc > 1:7898771‑M1/1‑39 (MQ=255) aaacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTa > 1:6334785‑M1/31‑51 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca > 1:10786775‑M1/1‑38 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca > 1:2231025‑M1/1‑38 (MQ=255) ttACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgcca > 1:620591‑M1/1‑38 (MQ=255) aacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTAc > 1:10335580‑M1/30‑51 (MQ=255) aacactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTAc > 1:413763‑M1/30‑51 (MQ=255) tACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaa < 1:6501891‑M1/51‑15 (MQ=255) cactatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTg < 1:2213358‑M1/24‑1 (MQ=255) actatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGa < 1:2330677‑M1/25‑1 (MQ=255) actatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGa > 1:10415027‑M1/27‑51 (MQ=255) ctatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGAt < 1:6386928‑M1/26‑1 (MQ=255) ctatcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGAt > 1:4277779‑M1/26‑51 (MQ=255) tGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaactta > 1:8698468‑M1/1‑33 (MQ=255) tGCGCAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaactta < 1:1386694‑M1/51‑19 (MQ=255) attaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATaa < 1:955454‑M1/28‑1 (MQ=255) atcaataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATaa > 1:8473209‑M1/24‑51 (MQ=255) cgcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttact < 1:4000280‑M1/51‑21 (MQ=255) gcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactg > 1:5386413‑M1/1‑30 (MQ=255) gcAAGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactg > 1:726021‑M1/1‑30 (MQ=255) aataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAaga > 1:875977‑M1/21‑50 (MQ=255) ataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGt < 1:9806382‑M1/32‑1 (MQ=255) ataagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGt > 1:7511775‑M1/20‑51 (MQ=255) aaGCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgat > 1:8839609‑M1/1‑28 (MQ=255) taagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTa < 1:3222568‑M1/33‑1 (MQ=255) taagttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTa < 1:8312871‑M1/33‑1 (MQ=255) gCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattt > 1:664233‑M1/1‑26 (MQ=255) gCATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattt < 1:6719204‑M1/51‑26 (MQ=255) cATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattta < 1:2492321‑M1/51‑27 (MQ=255) cATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattta < 1:9672915‑M1/51‑27 (MQ=255) cATCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgattta < 1:3832197‑M1/51‑27 (MQ=255) ttggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGt > 1:2063881‑M1/15‑51 (MQ=255) tCTTATAAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagt < 1:1265472‑M1/51‑29 (MQ=255) tggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTa < 1:2623650‑M1/38‑1 (MQ=255) tggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTa > 1:3723860‑M1/14‑51 (MQ=255) ggagtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTaa < 1:9295231‑M1/39‑1 (MQ=255) tataAAGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgta > 1:4862051‑M1/1‑20 (MQ=255) agtcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACg < 1:716203‑M1/41‑1 (MQ=255) tcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTg > 1:5889780‑M1/9‑51 (MQ=255) tcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTg < 1:10875060‑M1/43‑1 (MQ=255) tcattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTg > 1:8421470‑M1/9‑51 (MQ=255) cattaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTgg > 1:858048‑M1/8‑51 (MQ=255) attaccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGc < 1:4932476‑M1/45‑1 (MQ=255) aGCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatg < 1:9519913‑M1/51‑37 (MQ=255) gCAATAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatgg < 1:9085860‑M1/51‑38 (MQ=255) taccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAg > 1:4755748‑M1/5‑51 (MQ=255) taccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAg > 1:1769552‑M1/5‑51 (MQ=255) accAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGa < 1:27704‑M1/48‑1 (MQ=255) aaTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtg < 1:10015141‑M1/51‑40 (MQ=255) ccAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGa > 1:4593553‑M1/3‑50 (MQ=255) aTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgt < 1:2962273‑M1/51‑41 (MQ=255) aTAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgt > 1:5663390‑M1/1‑11 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:6908875‑M1/1‑10 (MQ=255) tAAAGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:7690067‑M1/1‑10 (MQ=255) aaaGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgttt < 1:6124716‑M1/51‑43 (MQ=255) aaGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttt > 1:5274391‑M1/1‑8 (MQ=255) aGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgttttt < 1:10821460‑M1/51‑45 (MQ=255) aGTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgttttt < 1:1133486‑M1/51‑45 (MQ=255) aGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACAtt > 1:3608842/1‑51 (MQ=255) aGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACAtt < 1:3460214/51‑1 (MQ=255) gTTTTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttg < 1:3085714‑M1/51‑46 (MQ=255) gTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACAttt < 1:1851768/51‑1 (MQ=255) tttttggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 1:1235209‑M1/1‑5 (MQ=255) tttttGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACAtttt < 1:5116892/51‑1 (MQ=255) tttttGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACAtttt > 1:1950297/1‑51 (MQ=255) ttttGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTa < 1:9149964/51‑1 (MQ=255) tttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg > 1:10070972‑M1/1‑3 (MQ=255) tttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 1:5510347‑M1/51‑49 (MQ=255) tttggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 1:4646971‑M1/51‑49 (MQ=255) tttggtgatgctgccaacttactgatttagggtatgatggtgtttttga > 1:10533531‑M1/1‑3 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:9255025‑M1/1‑1 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:9458581‑M1/1‑1 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg < 1:10388787‑M1/51‑51 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg < 1:7028704‑M1/51‑51 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:1531255‑M1/1‑1 (MQ=255) tggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:4460109‑M1/1‑1 (MQ=255) | TACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGCCAGCCTATTACTGATAAGAGTATTGTAACGTGGCAGAACATTTTACTG > REL606/4462613‑4462713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |