| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,405,131 | IS1 (–) +9 bp | 100% | coding (168‑176/1347 nt) | fadL → | long‑chain fatty acid outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2263507 | NA (NA) | 97 (1.020) | 57/80 | NT | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2405131 = | 0 (0.000) | coding (168/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter | |||||
| * | ? | REL606 | = 2405139 | 0 (0.000) | 97 (1.020) | 56/80 | NT | 100% | coding (176/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter |
| ? | REL606 | 2407442 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 148 total aligned reads displayed.
AAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC > REL606/2407392‑2407489 | aaGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAg > 1:7536346/1‑51 (MQ=255)aaGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAg < 1:10521972/51‑1 (MQ=255) aGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAgg < 1:10831368/51‑1 (MQ=255) gCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGt > 1:9455968/1‑51 (MQ=255) gCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGt < 1:533051/51‑1 (MQ=255) cTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTa < 1:6699332/51‑1 (MQ=255) aTCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAAt < 1:7101236/51‑1 (MQ=255) aTCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAAt > 1:5063416/1‑51 (MQ=255) aTCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAAt < 1:6044149/51‑1 (MQ=255) aTCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAAt < 1:1846370/51‑1 (MQ=255) aTCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAAt > 1:1782947/1‑51 (MQ=255) aTCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAAt < 1:8749649/51‑1 (MQ=255) aTCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAAt > 1:614267/1‑51 (MQ=255) tCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATg < 1:8444280/51‑1 (MQ=255) tCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATg < 1:3850970/51‑1 (MQ=255) tCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATg > 1:6603019/1‑51 (MQ=255) cATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGa < 1:10770944/51‑1 (MQ=255) cATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGa < 1:3728482/51‑1 (MQ=255) cATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGa > 1:4054783/1‑51 (MQ=255) aTGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGAc < 1:4319284/51‑1 (MQ=255) tGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACt < 1:10512648/51‑1 (MQ=255) gCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTcc < 1:8324081/51‑1 (MQ=255) gCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTcc < 1:9161924/51‑1 (MQ=255) gCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTcc < 1:9478832/51‑1 (MQ=255) gCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTcc > 1:6548886/1‑51 (MQ=255) aGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCaa < 1:8233423/51‑1 (MQ=255) aGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCaa > 1:10385715/1‑51 (MQ=255) aGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCaa < 1:3662259/51‑1 (MQ=255) aGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCaa < 1:9923591/51‑1 (MQ=255) aGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCaa < 1:4866855/51‑1 (MQ=255) aaTCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACt > 1:9661480/1‑51 (MQ=255) aTCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACtt > 1:100242/1‑51 (MQ=255) aTCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACtt < 1:10562545/51‑1 (MQ=255) aTCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACtt < 1:5476048/51‑1 (MQ=255) tCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTa > 1:10191444/1‑51 (MQ=255) tCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTa < 1:2579300/51‑1 (MQ=255) cATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTAt > 1:9981558/1‑51 (MQ=255) cATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTAt > 1:7211514/1‑51 (MQ=255) cATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTAt > 1:9761690/1‑51 (MQ=255) aTTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTAtt < 1:2981343/51‑1 (MQ=255) aTTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTAtt < 1:10161486/51‑1 (MQ=255) aTTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTAtt < 1:9634500/51‑1 (MQ=255) tttGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTg < 1:9792622/51‑1 (MQ=255) tttGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTg > 1:5432899/1‑51 (MQ=255) tttGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTg < 1:3457415/51‑1 (MQ=255) ttGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGa < 1:5348870/51‑1 (MQ=255) tGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGAt < 1:4853226/51‑1 (MQ=255) tGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGAt > 1:9647111/1‑51 (MQ=255) tGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGAt > 1:8667071/1‑51 (MQ=255) tGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGAt > 1:5462104/1‑51 (MQ=255) tGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGAt > 1:632523/1‑51 (MQ=255) gCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATa < 1:7398751/51‑1 (MQ=255) cAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAg < 1:4065814/51‑1 (MQ=255) aaCTGGTTCCGATCATCAGGTTGTAGGTAATGGCTCCAACTTATTGATAgt > 1:5656304/1‑51 (MQ=255) aaCTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAgt > 1:7969106/1‑51 (MQ=255) aaCTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAgt > 1:5746102/1‑51 (MQ=255) aaCTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAgt > 1:3700934/1‑51 (MQ=255) aCTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAgtg < 1:7242964/51‑1 (MQ=255) cTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAgtgt > 1:4437533/1‑51 (MQ=255) tGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGtt < 1:803435/51‑1 (MQ=255) tGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGtt < 1:3099010/51‑1 (MQ=255) ggTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGttt < 1:2832887/51‑1 (MQ=255) ggTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGttt < 1:5823915/51‑1 (MQ=255) gTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGtttt < 1:571545/51‑1 (MQ=255) ttCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTa < 1:4346504/51‑1 (MQ=255) ttCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTa < 1:1886709/51‑1 (MQ=255) ccGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATg > 1:1577928/1‑51 (MQ=255) ccGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATg < 1:2447322/51‑1 (MQ=255) ccGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATg < 1:3516113/51‑1 (MQ=255) ccGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATg > 1:2308386/1‑51 (MQ=255) ccGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATg < 1:9041469/51‑1 (MQ=255) cGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGt > 1:1890102/1‑51 (MQ=255) cGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGt < 1:10563456/51‑1 (MQ=255) gATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt > 1:1459159/1‑51 (MQ=255) gATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt < 1:1470837/51‑1 (MQ=255) gATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt > 1:9599782/1‑51 (MQ=255) atcatcAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTc > 1:7665882/1‑51 (MQ=255) atcatcAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTc > 1:6578690/1‑51 (MQ=255) atcatcAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTc < 1:3026505/51‑1 (MQ=255) atcatcAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTc > 1:6245463/1‑51 (MQ=255) tcatcaGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa < 1:8944438/51‑1 (MQ=255) tcatcaGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa < 1:1536775/51‑1 (MQ=255) tcatcaGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa < 1:2667021/51‑1 (MQ=255) atcaGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa > 1:8142697/1‑51 (MQ=255) atcaGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa > 1:7023567/1‑51 (MQ=255) tcaGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt > 1:9247141/1‑51 (MQ=255) tcaGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt > 1:9028972/1‑51 (MQ=255) tcaGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt > 1:2613527/1‑51 (MQ=255) caGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATa < 1:4385462/51‑1 (MQ=255) ggTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt < 1:5206752/51‑1 (MQ=38) ggTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt > 1:2116006/1‑51 (MQ=38) ggTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt < 1:3630542/51‑1 (MQ=38) ggTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt < 1:3245932/51‑1 (MQ=38) gTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATg < 1:6322539/51‑1 (MQ=38) ttGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc > 1:8047050/1‑51 (MQ=35) ttGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc < 1:10430415/51‑1 (MQ=35) ttGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc > 1:6419859/1‑51 (MQ=35) tGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGcc > 1:8996544/1‑51 (MQ=33) gTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGccc > 1:6070396/1‑51 (MQ=31) gTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGccc > 1:3630699/1‑51 (MQ=31) | AAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC > REL606/2407392‑2407489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |