| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,405,131 | IS1 (–) +9 bp | 100% | coding (168‑176/1347 nt) | fadL → | long‑chain fatty acid outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2263507 | NA (NA) | 97 (1.020) | 57/80 | NT | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2405131 = | 0 (0.000) | coding (168/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter | |||||
| * | ? | REL606 | = 2405139 | 0 (0.000) | 97 (1.020) | 56/80 | NT | 100% | coding (176/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter |
| ? | REL606 | 2407442 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 241 total aligned reads displayed.
CTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTC > REL606/2405081‑2405181 | cTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAAc < 1:8534031/51‑1 (MQ=255) tGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACg > 1:1424623/1‑51 (MQ=255) tGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACg > 1:6692305/1‑51 (MQ=255) gggCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGt < 1:1175621/51‑1 (MQ=255) gggCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGt > 1:1868309/1‑51 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTc < 1:4535604‑M2/4‑1 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCa > 1:6976916‑M2/47‑51 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCa > 1:9922005‑M2/47‑51 (MQ=255) gCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCa < 1:2921686/51‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCAg < 1:2304419‑M2/6‑1 (MQ=255) cGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCGGGTAACGTCAGc < 1:5522363/51‑1 (MQ=255) cGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGc > 1:7210417/1‑51 (MQ=255) gggCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGcc > 1:6831827/1‑51 (MQ=255) gggCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGcc > 1:5001249/1‑51 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCAGcc < 1:704196‑M2/8‑1 (MQ=255) ggCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCg > 1:5328493/1‑51 (MQ=255) ggCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCg < 1:237563/51‑1 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccCGTCAGCCg < 1:2675845‑M2/9‑1 (MQ=255) gCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGg < 1:6648697‑M1/51‑2 (MQ=255) ttATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCg > 1:7287972/1‑48 (MQ=255) ttATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggt < 1:10217293‑M1/51‑4 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTaa > 1:10003448‑M2/40‑51 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTaa > 1:9219804‑M2/40‑51 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAc < 1:1654070‑M2/13‑1 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAc < 1:8693068‑M2/13‑1 (MQ=255) aTTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaa < 1:10897933‑M1/51‑6 (MQ=255) ttCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaat < 1:8776379‑M1/51‑7 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAccc < 1:4818999‑M2/15‑1 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAccc < 1:279302‑M2/15‑1 (MQ=255) tCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatg < 1:4432057‑M1/51‑8 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAcccc > 1:6371661‑M2/36‑51 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAcccc < 1:2412281‑M2/16‑1 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAAcccc < 1:3354982‑M2/16‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCg < 1:2175287‑M2/17‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCg > 1:9385614‑M2/35‑51 (MQ=255) catacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGc < 1:1723854‑M2/18‑1 (MQ=255) aGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgac > 1:4299094‑M1/1‑42 (MQ=255) aGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgac < 1:1826030‑M1/51‑10 (MQ=255) aGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgac < 1:8923918‑M1/51‑10 (MQ=255) ggggAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgact < 1:2055365‑M1/51‑11 (MQ=255) atacactaaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCa > 1:9102231‑M2/33‑51 (MQ=255) gAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactcca < 1:1447998‑M1/51‑14 (MQ=255) gAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactcca < 1:7624469‑M1/51‑14 (MQ=255) aaGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaa > 1:5797193‑M1/1‑37 (MQ=255) aGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaac < 1:9499518‑M1/51‑16 (MQ=255) ggCGCAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaact < 1:4985342‑M1/51‑17 (MQ=255) aaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTa < 1:3787226‑M2/26‑1 (MQ=255) aaatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTa > 1:3084373‑M2/26‑51 (MQ=255) cgcAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaactta > 1:3585127‑M1/1‑33 (MQ=255) aatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTAc > 1:5668197‑M2/25‑51 (MQ=255) aatcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTAc > 1:3900811‑M2/25‑51 (MQ=255) atcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACt > 1:8461888‑M2/24‑51 (MQ=255) tcagtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTa > 1:7359789‑M2/23‑51 (MQ=255) cAATTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttatt < 1:8307602‑M1/51‑21 (MQ=255) cagtaagttggcagcatccccCGTCAGCCGTAACCCCGCATTGATTACTAt < 1:5910799‑M2/30‑1 (MQ=255) aaTTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattg < 1:9306273‑M1/51‑22 (MQ=255) aaTTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattg < 1:10620942‑M1/51‑22 (MQ=255) agtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATg < 1:10731048‑M2/31‑1 (MQ=255) agtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATg < 1:6765962‑M2/31‑1 (MQ=255) aTTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattga < 1:3708351‑M1/51‑23 (MQ=255) aTTGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattga < 1:2737197‑M1/51‑23 (MQ=255) gtaagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGt < 1:8091790‑M2/32‑1 (MQ=255) taagttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGtt < 1:3447649‑M2/33‑1 (MQ=255) tGCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgata < 1:9173642‑M1/51‑25 (MQ=255) gCCGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatag < 1:299192‑M1/51‑26 (MQ=255) ccGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagt < 1:4050977‑M1/51‑27 (MQ=255) ccGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagt < 1:7201292‑M1/51‑27 (MQ=255) ccGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagt < 1:9610808‑M1/51‑27 (MQ=255) agttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTg > 1:2584754‑M2/17‑51 (MQ=255) agttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTg > 1:1327142‑M2/17‑51 (MQ=255) agttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTg < 1:10538079‑M2/35‑1 (MQ=255) gttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGa < 1:1982931‑M2/36‑1 (MQ=255) gttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGa > 1:9542563‑M2/16‑51 (MQ=255) gttggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGa < 1:1074119‑M2/36‑1 (MQ=255) cGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtg < 1:8396143‑M1/51‑28 (MQ=255) cGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtg > 1:10813818‑M1/1‑24 (MQ=255) cGATGATGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtg > 1:4867533‑M1/1‑24 (MQ=255) gatgatGCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgt > 1:10103699‑M1/1‑23 (MQ=255) tggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGAcc < 1:3186444‑M2/38‑1 (MQ=255) tggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGAcc < 1:1692984‑M2/38‑1 (MQ=255) tggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGAcc < 1:5094423‑M2/38‑1 (MQ=255) tgatgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgttt < 1:410809‑M1/51‑31 (MQ=255) ggcagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCg < 1:7826738‑M2/39‑1 (MQ=255) gcagcatcgccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGc < 1:322058‑M2/40‑1 (MQ=255) gatgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgtttt > 1:10670579‑M1/1‑20 (MQ=255) cagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGcc > 1:210669‑M2/11‑51 (MQ=255) cagcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGcc < 1:5242088‑M2/41‑1 (MQ=255) atgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgtttta < 1:7788193‑M1/51‑33 (MQ=255) atgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgtttta < 1:9447439‑M1/51‑33 (MQ=255) tgCAGGTAACGTCAGCCGggtaatgactccaacttattgatagtgttttat < 1:6182979‑M1/51‑34 (MQ=255) agcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGccc < 1:7689311‑M2/42‑1 (MQ=255) agcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGccc < 1:5300923‑M2/42‑1 (MQ=255) agcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGccc > 1:4692624‑M2/10‑51 (MQ=255) gcatcaccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCg < 1:2778140‑M2/43‑1 (MQ=255) gTAACGTCAGCCGggtaatgactccaacttattgatagtgttttatgttca < 1:1318279‑M1/51‑39 (MQ=255) accCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACAtt > 1:6031437‑M2/4‑51 (MQ=255) ccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGAc < 1:7445316‑M2/45‑1 (MQ=255) ccCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACAtt < 1:4114814‑M2/48‑1 (MQ=255) cGTCAGCCGggtaatgactccaacttattgatagtgttttgtgttcagata < 1:5078680‑M1/51‑43 (MQ=255) cGTCAGCCGggtaatgactccaacttattgatagtgttttatgttcagata > 1:8434603‑M1/1‑9 (MQ=255) | CTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTC > REL606/2405081‑2405181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |