| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,405,131 | IS1 (–) +9 bp | 100% | coding (168‑176/1347 nt) | fadL → | long‑chain fatty acid outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2263507 | NA (NA) | 97 (1.020) | 57/80 | NT | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2405131 = | 0 (0.000) | coding (168/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter | |||||
| * | ? | REL606 | = 2405139 | 0 (0.000) | 97 (1.020) | 56/80 | NT | 100% | coding (176/1347 nt) | fadL | long‑chain fatty acid outer membrane transporter |
| ? | REL606 | 2407442 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 113 total aligned reads displayed.
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2263460‑2263507‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTT > REL606/2405131‑2405179 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGT > 1:2612800/1‑51CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGT < 1:5580265/51‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTC > 1:6825500/1‑51 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTC < 1:9480872/51‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTC < 1:4535604/51‑1 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCA > 1:9922005/1‑51 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCA > 1:6976916/1‑51 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAG > 1:5832585/1‑51 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAG < 1:2304419/51‑1 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAG < 1:46635/51‑1 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAG > 1:7684682/1‑51 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGC > 1:8425717/1‑51 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGC > 1:2943396/1‑51 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGC > 1:1718807/1‑51 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGC < 1:7426833/51‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCC > 1:7387289/1‑51 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCC < 1:8016005/51‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCC < 1:704196/51‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCG < 1:2675845/51‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCG < 1:9132920/51‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCG < 1:8232764/51‑1 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGT > 1:6123468/1‑51 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAA > 1:10003448/1‑51 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAA < 1:1990390/51‑1 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAA > 1:10544911/1‑51 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAAC > 1:4876351/1‑51 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAAC > 1:656463/1‑51 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAAC < 1:8693068/50‑1 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAAC < 1:1654070/50‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCC < 1:279302/51‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCC < 1:2343779/51‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCC < 1:2412281/51‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCC > 1:6371661/1‑51 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCC < 1:3354982/51‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCG > 1:9385614/1‑51 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCG < 1:2175287/51‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCG < 1:10753660/51‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCG > 1:700491/1‑51 CATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGC > 1:1404143/1‑51 CATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGC < 1:1723854/51‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCA > 1:9462563/1‑51 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCA > 1:7250658/1‑51 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCA < 1:1110246/51‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCA > 1:9102231/1‑51 TACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCAT > 1:5088271/1‑51 TACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCAT > 1:4962741/1‑51 ACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATT < 1:10667284/51‑1 CACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTG > 1:5010727/1‑51 ACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGA > 1:7024857/1‑51 CTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGAT > 1:6117524/1‑51 AAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTA > 1:3084373/1‑51 AAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTA > 1:7242594/1‑51 AAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTA > 1:4604192/1‑51 AAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTA < 1:3787226/51‑1 AAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTA > 1:3311659/1‑51 AATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTAC > 1:5668197/1‑51 AATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTAC > 1:3900811/1‑51 ATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACT > 1:8461888/1‑51 TCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTA > 1:7359789/1‑51 CAGTAAGTTGGCAGCATCCCCCGTCAGCCGTAACCCCGCATTGATTACTAT < 1:5910799/51‑1 CAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTAT > 1:5049430/1‑51 CAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTAT > 1:5274835/1‑51 AGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATG > 1:7203594/1‑51 AGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATG < 1:10731048/51‑1 AGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATG < 1:6765962/51‑1 GTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGT > 1:6389466/1‑51 GTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGT > 1:8472776/1‑51 TAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTT < 1:3447649/51‑1 AGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTG > 1:2584754/1‑51 AGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTG > 1:1327142/1‑51 AGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTG < 1:10538079/51‑1 GTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGA < 1:1982931/51‑1 GTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGA > 1:2191870/1‑51 GTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGA > 1:9542563/1‑51 GTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGA < 1:1074119/51‑1 GTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGA > 1:217220/1‑51 TTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGAC < 1:10714382/51‑1 TGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACC < 1:5094423/51‑1 TGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACC < 1:3186444/51‑1 TGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACC < 1:1692984/51‑1 GGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCG > 1:5671579/1‑51 GGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCG < 1:7826738/51‑1 GCAGCATCGCCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGC < 1:322058/51‑1 GCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGC < 1:6717441/51‑1 CAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCC > 1:210669/1‑51 CAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCC < 1:5242088/51‑1 AGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCC < 1:5300923/51‑1 AGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCC > 1:9880573/1‑51 AGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCC > 1:4204385/1‑51 AGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCC < 1:7689311/51‑1 AGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCC > 1:4692624/1‑51 AGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACC < 1:4986800/47‑1 GCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCG < 1:2778140/51‑1 CATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGA < 1:2565927/51‑1 CCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTT > 1:1771148/1‑51 CCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATT < 1:4114814/50‑1 CCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACAT < 1:876652/49‑1 CCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACAT < 1:9310178/49‑1 CCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGAC < 1:7445316/47‑1 CCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCC < 1:3899221/44‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2263460‑2263507‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTT > REL606/2405131‑2405179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |