Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
MC JC | REL606 | 3,482,398 | Δ25 bp | 100% | coding (714‑738/2706 nt) | malT → | transcriptional regulator MalT |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 3482398 | 3482422 | 25 | 147 [0] | [0] 149 | malT | transcriptional regulator MalT |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3482397 | 0 (0.000) | 108 (1.140) | 56/80 | NT | 100% | coding (713/2706 nt) | malT | transcriptional regulator MalT |
? | REL606 | 3482423 = | 0 (0.000) | coding (739/2706 nt) | malT | transcriptional regulator MalT |
Only 100 of 147 total aligned reads displayed.
ACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATC > REL606/3482347‑3482447 | aCTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATaa > 1:7553834/1‑51 (MQ=255) aCTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATaa < 1:8675557/51‑1 (MQ=255) cTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAa > 1:9679710‑M1/1‑50 (MQ=255) cTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAa < 1:3443775‑M1/51‑2 (MQ=255) cTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAa < 1:6674529‑M1/51‑2 (MQ=255) cTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAa > 1:3711632‑M1/1‑50 (MQ=255) cTACAGCTAATCGCCCTCTCCACCCGGCAGAATACCCACTCAGCCCATAAa < 1:7347876‑M1/51‑2 (MQ=255) tACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaa < 1:9749478‑M1/51‑3 (MQ=255) tACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaa < 1:3545570‑M1/51‑3 (MQ=255) tACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaa > 1:5574620‑M1/1‑49 (MQ=255) aCAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaat > 1:3089801‑M1/1‑48 (MQ=255) aCAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaat < 1:9077641‑M1/51‑4 (MQ=255) aCAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaat < 1:3090495‑M1/51‑4 (MQ=255) aCAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaat < 1:4795578‑M1/51‑4 (MQ=255) aGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgc < 1:9349548‑M1/51‑6 (MQ=255) gCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgcc < 1:9919367‑M1/51‑7 (MQ=255) cTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgcca > 1:10175745‑M1/1‑44 (MQ=255) cTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgcca < 1:500067‑M1/51‑8 (MQ=255) cTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgcca < 1:1823080‑M1/51‑8 (MQ=255) tAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccag < 1:8090551‑M1/51‑9 (MQ=255) aaTCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagc < 1:10235424‑M1/51‑10 (MQ=255) tCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagcca < 1:8598639‑M1/51‑12 (MQ=255) tCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagcca < 1:3203014‑M1/51‑12 (MQ=255) cGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccat < 1:5423310‑M1/51‑13 (MQ=255) cGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccat < 1:5620988‑M1/51‑13 (MQ=255) gCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatc < 1:4166070‑M1/51‑14 (MQ=255) gCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatc > 1:4023598‑M1/1‑38 (MQ=255) cccTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatct < 1:7748194‑M1/51‑15 (MQ=255) ccTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctt < 1:2022854‑M1/51‑16 (MQ=255) ccTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctt < 1:127474‑M1/51‑16 (MQ=255) ccTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctt > 1:1587024‑M1/1‑36 (MQ=255) ctctCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatcttt < 1:1352796‑M1/51‑17 (MQ=255) ctctCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatcttt < 1:1008253‑M1/51‑17 (MQ=255) tctcCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttc > 1:10016745‑M1/1‑34 (MQ=255) tctcCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttc < 1:8603797‑M1/51‑18 (MQ=255) tctcCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttc < 1:7334941‑M1/51‑18 (MQ=255) tctcCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttc > 1:6962591‑M1/1‑34 (MQ=255) ctcCGCCCGGCAGAATACCCCCTCAGCCCATAAaatgccagccatctttcg < 1:7813115‑M1/51‑19 (MQ=255) ctcCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcg < 1:5443816‑M1/51‑19 (MQ=255) ctcCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcg > 1:7565586‑M1/1‑33 (MQ=255) ctcCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcg < 1:9627594‑M1/51‑19 (MQ=255) tcCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcgg > 1:9297572‑M1/1‑32 (MQ=255) cGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggat < 1:8654496‑M1/51‑22 (MQ=255) cGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggat < 1:10414945‑M1/51‑22 (MQ=255) cGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggat > 1:1685605‑M1/1‑30 (MQ=255) gCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggatt > 1:8972312‑M1/1‑29 (MQ=255) cccGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggatta > 1:9253684‑M1/1‑28 (MQ=255) cccGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggatta < 1:10397090‑M1/51‑24 (MQ=255) ccGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattat < 1:9739837‑M1/51‑25 (MQ=255) ccGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattat < 1:7881938‑M1/51‑25 (MQ=255) ccGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattat > 1:9764287‑M1/1‑27 (MQ=255) ccGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattat > 1:3392860‑M1/1‑27 (MQ=255) ccGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattat > 1:6525783‑M1/1‑27 (MQ=255) cGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatc > 1:10066128‑M1/1‑26 (MQ=255) cGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatc > 1:1898042‑M1/1‑26 (MQ=255) ggCAGAATACCCTCTCAGCCCATAAaatgccagccatctttcggattatct < 1:9148227‑M1/51‑27 (MQ=255) ggCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatct < 1:2279443‑M1/51‑27 (MQ=255) ggCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatct < 1:8441919‑M1/51‑27 (MQ=255) gCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctg > 1:4706819‑M1/1‑24 (MQ=255) cAGAATACCCACTCAGCCCATAAaatgccagctatctttcggattatctgg > 1:2610674‑M1/1‑23 (MQ=255) aGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggt < 1:1138229‑M1/51‑30 (MQ=255) aGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggt > 1:8861118‑M1/1‑22 (MQ=255) aGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggt < 1:9506223‑M1/51‑30 (MQ=255) gAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtc < 1:9715142‑M1/51‑31 (MQ=255) aTACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcga < 1:6281906‑M1/51‑33 (MQ=255) aTACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcga < 1:4027169‑M1/51‑33 (MQ=255) tACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgat > 1:10708308‑M1/1‑18 (MQ=255) tACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgat < 1:6589388‑M1/51‑34 (MQ=255) aCCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatg > 1:2617190‑M1/1‑17 (MQ=255) aCCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatg > 1:7628864‑M1/1‑17 (MQ=255) cccACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatna < 1:1983335‑M1/51‑36 (MQ=255) ccACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgag < 1:6946101‑M1/51‑37 (MQ=255) ccACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgag < 1:10491075‑M1/51‑37 (MQ=255) ccACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgag < 1:1281165‑M1/51‑37 (MQ=255) ccACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgag > 1:4857404‑M1/1‑15 (MQ=255) cACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgagg < 1:5673844‑M1/51‑38 (MQ=255) cTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggtt < 1:9493466‑M1/51‑40 (MQ=255) cTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgag < 1:4470921‑M1/48‑37 (MQ=255) cAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggtttt < 1:10032484‑M1/51‑42 (MQ=255) cAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggtttt < 1:9319358‑M1/51‑42 (MQ=255) cAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggtttt < 1:536316‑M1/51‑42 (MQ=255) aGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttg > 1:10471970‑M1/1‑9 (MQ=255) gCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttgg < 1:3555017‑M1/51‑44 (MQ=255) gCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttgg > 1:864930‑M1/1‑8 (MQ=255) gCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttgg < 1:2435073‑M1/51‑44 (MQ=255) cccATAAaatgccagccatctttcggattatctggtcgatgaggttttgga > 1:4595542‑M1/1‑7 (MQ=255) cccATAAaatgccagccatctttcggattatctggtcgatgaggttttgga < 1:3255170‑M1/51‑45 (MQ=255) cATAAaatgccagccatctttcggattatctggtcgatgaggttttggata < 1:5505325‑M1/51‑47 (MQ=255) cATAAaatgccagccatctttcggattatctggtcgatgaggttttggata > 1:10940071‑M1/1‑5 (MQ=255) aTAAaatgccagccatctttcggattatctggtcgatgaggttttggataa > 1:6741041‑M1/1‑4 (MQ=255) aTAAaatgccagccatctttcggattatctggtcgatgaggttttggataa < 1:4151773‑M1/51‑48 (MQ=255) tAAaatgccagccatctttcggattatctggtcgatgaggttttggataac < 1:5742136‑M1/51‑49 (MQ=255) aaaatgccagccatctttcggattatctggtcgatgaggttttggataacg < 1:386761‑M1/51‑50 (MQ=255) aaaatgccagccatctttcggattatctggtcgatgaggttttggataacg > 1:3398469‑M1/1‑2 (MQ=255) aaaatgccagccatctttcggattatctggtcgatgaggttttggataacg < 1:9890450‑M1/51‑50 (MQ=255) aaaatgccagccatctttcggattatctggtcgatgaggttttggataacg < 1:6773584‑M1/51‑50 (MQ=255) aaatgccagccatctttcggattatctggtcgatgaggttttggataacgt < 1:10113367‑M1/51‑51 (MQ=255) aaatgccagccatctttcggattatctggtcgatgaggttttggataacgt > 1:1072688‑M1/1‑1 (MQ=255) aaatgccagccatctttcggattatctggtcgatgaggttttggataacgt > 1:7444656‑M1/1‑1 (MQ=255) aaatgccagccatctttcggattatctggtcgatgaggttttggataacgt < 1:5472493‑M1/51‑51 (MQ=255) | ACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATC > REL606/3482347‑3482447 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |