Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
MC JC | REL606 | 3,482,398 | Δ25 bp | 100% | coding (714‑738/2706 nt) | malT → | transcriptional regulator MalT |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 3482398 | 3482422 | 25 | 147 [0] | [0] 149 | malT | transcriptional regulator MalT |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3482397 | 0 (0.000) | 108 (1.140) | 56/80 | NT | 100% | coding (713/2706 nt) | malT | transcriptional regulator MalT |
? | REL606 | 3482423 = | 0 (0.000) | coding (739/2706 nt) | malT | transcriptional regulator MalT |
Only 100 of 145 total aligned reads displayed.
CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3482348‑3482397 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT > REL606/3482423‑3482472 CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA < 1:4074017/51‑1 CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA < 1:6674529/51‑1 CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA > 1:9679710/1‑51 CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA < 1:3443775/51‑1 CTACAGCTAATCGCCCTCTCCACCCGGCAGAATACCCACTCAGCCCATAAA < 1:7347876/51‑1 TACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAA < 1:9749478/51‑1 TACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAA > 1:5574620/1‑51 ACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAAT < 1:9077641/51‑1 ACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAAT < 1:6197904/51‑1 ACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAAT < 1:3090495/51‑1 GCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCC < 1:9919367/51‑1 CTAATTGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCA > 1:4659355/1‑51 CTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCA < 1:5461121/51‑1 CTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCA < 1:1823080/51‑1 CTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCA > 1:10175745/1‑51 AATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGC < 1:10235424/51‑1 TCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCA < 1:3203014/51‑1 CGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCAT < 1:5423310/51‑1 CGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCAT > 1:1204110/1‑51 CGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCAT < 1:4817858/51‑1 CCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCT < 1:7748194/51‑1 CCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTT > 1:1587024/1‑51 CCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTT < 1:2022854/51‑1 CTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTT < 1:1352796/51‑1 CTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTT < 1:3911900/51‑1 CTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTT < 1:1008253/51‑1 TCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTC > 1:10016745/1‑51 TCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTC < 1:8603797/51‑1 TCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTC > 1:6962591/1‑51 TCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTC < 1:7334941/51‑1 CTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCG < 1:7623992/51‑1 CTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCG < 1:922148/51‑1 CTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCG < 1:5536470/51‑1 CTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCG > 1:7565586/1‑51 CTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCG < 1:9627594/51‑1 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG > 1:2487315/1‑51 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG < 1:79259/51‑1 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG < 1:5179512/51‑1 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG > 1:4300491/1‑51 CGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGAT > 1:1685605/1‑51 CGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGAT < 1:8654496/51‑1 CGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGAT < 1:10414945/51‑1 GCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATT > 1:8972312/1‑51 GCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATT < 1:10875020/51‑1 CCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTA < 1:10397090/51‑1 CCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTA > 1:9253684/1‑51 CCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTAT < 1:7881938/51‑1 CCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTAT > 1:3392860/1‑51 CCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTAT < 1:9739837/51‑1 CCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTAT < 1:935489/51‑1 CCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTAT > 1:9764287/1‑51 CGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATC > 1:10521177/1‑51 CGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATC > 1:1898042/1‑51 CGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATC > 1:10066128/1‑51 GGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCT < 1:8441919/51‑1 GCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTG > 1:4706819/1‑51 AGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGT > 1:5653263/1‑51 AGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGT < 1:1138229/51‑1 AGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGT > 1:8861118/1‑51 AGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGT < 1:9506223/51‑1 GAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTC < 1:9715142/51‑1 AATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCG < 1:8535751/51‑1 ATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGA < 1:6281906/51‑1 ATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGA < 1:9301197/51‑1 ATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGA < 1:4027169/51‑1 TACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGAT < 1:7761779/51‑1 TACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGAT < 1:6589388/51‑1 ACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATG > 1:2617190/1‑51 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG > 1:4857404/1‑51 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:1281165/51‑1 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:2902981/51‑1 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:10491075/51‑1 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:6946101/51‑1 CACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGG < 1:5673844/51‑1 CACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGG > 1:7504889/1‑51 ACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGT < 1:8642450/51‑1 CTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTT < 1:9493466/51‑1 CTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:4470921/48‑1 CAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTT < 1:536316/51‑1 CAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTT < 1:9319358/51‑1 CAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTT < 1:10032484/51‑1 AGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTG > 1:10471970/1‑51 AGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTG > 1:1928/1‑51 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGG < 1:2045379/51‑1 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGG < 1:2435073/51‑1 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGG > 1:8658271/1‑51 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGG < 1:3555017/51‑1 CCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGAT < 1:3283383/51‑1 CATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATA < 1:3491434/51‑1 ATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAA > 1:6741041/1‑51 ATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAA < 1:4151773/51‑1 ATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAA > 1:3660536/1‑51 ATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAA < 1:6548572/51‑1 TAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAAC < 1:3154690/51‑1 AAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACG < 1:386761/51‑1 AAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACG < 1:9890450/51‑1 AAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACG < 1:6773584/51‑1 AAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT < 1:5472493/51‑1 AAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT < 1:10113367/51‑1 AAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT > 1:1072688/1‑51 CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3482348‑3482397 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT > REL606/3482423‑3482472 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |