New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	100	1 =	0 (0.000)	20 (0.300)	17/200	3.3	37.7%	intergenic (–/–)	–/–	–/–
	?	6	= 55690	66 (0.990)					intergenic (–/–)	–/–	–/–
Rejected: Coverage evenness skew score above cutoff.

CGCAAACGTGTGCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTGAGTTGTATCGTG  >  6/55591‑55786                                                                                                    |                                                                                                 cGCAAACGTGTGCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGa                                                                                                 >  1:946178/1‑101 (MQ=255)  gCAAACGTGTGCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGAc                                                                                                <  1:1434826/101‑1 (MQ=255)   cAAACGTGTGCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACa                                                                                               <  1:1139682/101‑1 (MQ=255)   cAAACGTGTGCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACa                                                                                               >  2:25703/1‑101 (MQ=255)   cAAACGTGTGCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACa                                                                                               >  1:572072/1‑101 (MQ=255)         tgtgCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACAt                                                                                         <  2:1250314/101‑1 (MQ=255)         tgtgCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACAt                                                                                         <  2:794313/101‑1 (MQ=255)          gtgCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATc                                                                                        >  2:1542942/1‑101 (MQ=255)          gtgCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATc                                                                                        >  1:120113/1‑101 (MQ=255)          gtgCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATc                                                                                        >  1:149021/1‑101 (MQ=255)           tgCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATcc                                                                                       <  1:694049/101‑1 (MQ=255)            gCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCg                                                                                      <  2:1065229/101‑1 (MQ=255)                gtgaaGGAAATCGCGATTTTAGTGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCTTTCACGCCGCATCCGACAAAACATCCGGcac                                                                                  <  2:1249744/97‑1 (MQ=38)                cTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGcac                                                                                  <  1:93162/101‑1 (MQ=255)                cTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGcac                                                                                  <  2:311791/101‑1 (MQ=255)                cTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGcac                                                                                  <  1:354578/101‑1 (MQ=255)                      gAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGa                                                                            >  2:1121699/1‑101 (MQ=255)                       aaaaCGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGAc                                                                           <  2:783732/101‑1 (MQ=255)                        aaaCGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACa                                                                          >  1:620991/1‑101 (MQ=255)                         aaCGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAg                                                                         >  2:675514/1‑101 (MQ=255)                            gcgATTTTAGCGTTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCaa                                                                      <  1:1654607/101‑1 (MQ=255)                             cgATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCaaa                                                                     >  1:1690140/1‑101 (MQ=255)                              gATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCaaaa                                                                    >  2:318663/1‑101 (MQ=255)                                ttttAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGa                                                                  >  1:360949/1‑101 (MQ=255)                                      cGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTaa                                                            <  1:1467021/101‑1 (MQ=255)                                      cGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTaa                                                            >  1:13048/1‑101 (MQ=255)                                         tAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAAc                                                         <  2:679888/101‑1 (MQ=255)                                               gCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAAt                                                   <  1:283547/101‑1 (MQ=255)                                               gCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAAt                                                   <  2:1667715/101‑1 (MQ=255)                                                cACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAAtt                                                  <  2:668618/101‑1 (MQ=255)                                                cACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAAtt                                                  <  2:133505/101‑1 (MQ=255)                                                  cGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTca                                                <  1:1188300/101‑1 (MQ=255)                                                   gtaaTTTGTTTGTCTGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTcac                                               <  1:229432/99‑1 (MQ=255)                                                   gAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTcac                                               <  1:532259/101‑1 (MQ=255)                                                   gAAATTTGTTTGTCGGAAGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTcac                                               <  2:640361/101‑1 (MQ=255)                                                    aaaTTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTcaca                                              >  1:1125645/1‑101 (MQ=255)                                                     aaTTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCacac                                             <  2:119397/101‑1 (MQ=255)                                                      aTTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCTGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACAcc                                            <  2:1609235/101‑1 (MQ=255)                                                      aTTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACAcc                                            <  2:1044274/101‑1 (MQ=255)                                                      aTTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACAcc                                            >  1:1128826/1‑101 (MQ=255)                                                       tttgtttgTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACAccc                                           <  2:434233/101‑1 (MQ=255)                                                            ttgtCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAg                                      <  1:1370415/101‑1 (MQ=255)                                                              gtCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTg                                    >  1:493344/1‑101 (MQ=255)                                                                cGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGAt                                  >  2:973609/1‑101 (MQ=255)                                                                cGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGAt                                  <  2:70644/101‑1 (MQ=255)                                                                    cGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAg                              >  1:770029/1‑101 (MQ=255)                                                                       aGTTCGGATAGGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATg                           >  2:1133711/1‑101 (MQ=255)                                                                       aGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATg                           <  2:1340251/101‑1 (MQ=255)                                                                       aGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATg                           >  2:204644/1‑101 (MQ=255)                                                                       aGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATg                           >  1:363726/1‑101 (MQ=255)                                                                         ttCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCa                         <  2:1589834/101‑1 (MQ=255)                                                                         ttCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCa                         <  1:1429452/101‑1 (MQ=255)                                                                            ggATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCaaaa                      <  2:1100347/101‑1 (MQ=255)                                                                            ggATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCaaaa                      <  2:770024/101‑1 (MQ=255)                                                                               tAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAaagca                   >  2:1039117/1‑101 (MQ=255)                                                                                aaGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAaagcaa                  <  2:811785/101‑1 (MQ=255)                                                                                 aGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAaagcaag                 <  1:318663/101‑1 (MQ=255)                                                                                  ggCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAaagcaagc                <  2:893229/101‑1 (MQ=255)                                                                                   gCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCt               <  2:1717571/101‑1 (MQ=255)                                                                                    cGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTg              >  1:1343977/1‑101 (MQ=255)                                                                                     gTTCACGCTGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTGa             >  2:1232852/1‑101 (MQ=255)                                                                                     gTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTGa             <  1:1241616/101‑1 (MQ=255)                                                                                     gTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTGa             >  1:968394/1‑101 (MQ=255)                                                                                          cgccgcATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTGAGTTGt        <  2:1347224/101‑1 (MQ=255)                                                                                           gccgcATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTGAGTTGTa       <  2:1038649/101‑1 (MQ=255)                                                                                                aTCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTGAGTTGTATCGTg  >  1:737207/1‑101 (MQ=255)                                                                                                    |                                                                                                 CGCAAACGTGTGCGTCTGCAGGAAAACGCGATTTTAGCGGTAATTCGCACGAAATTTGTTTGTCGGACGTAGTTCGGATAAGGCGTTCACGCCGCATCCGACAAAACATCCGGCACACCAGACAGCAAAAGATTTTAAAACGTTAATTCACACCCAGGAGTGATAAAGATGCAAAAGCAAGCTGAGTTGTATCGTG  >  6/55591‑55786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.