| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 100 | 1 = | 0 (0.000) | 20 (0.300) | 17/200 | 3.3 | 37.7% | intergenic (–/–) | –/– | –/– |
| ? | 6 | = 55690 | 66 (0.990) | intergenic (–/–) | –/– | –/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
‑‑‑‑‑‑‑‑‑GCAAACACTGCGAGAGCAGATTACCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAGCGTACTG > 100/1‑99 | ccgcatccggCAAACACTGCGAGAGCAGATTGCCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAg < 2:813081/92‑1 (MQ=255)ccgcatccggCAAACACTGCGAGAGCAGATTACCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAg > 2:485996/10‑101 (MQ=255) cgcatccggCAAACACTGCGAGAGCAGATTACCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAGc > 1:1399522/9‑101 (MQ=255) gcatccggCAAACACTGCGAGAGCAGATTACCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAGCg > 1:1190518/8‑101 (MQ=255) catccggCAAACACTGCGAGAGCAGATTACCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAGCGt > 1:612099/7‑101 (MQ=255) ccggCAAACACTGCGAGAGCAGATTACCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAGCGTACt < 2:973454/98‑1 (MQ=255) cggCAAACACTGCGAGAGCAGATTACCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAGCGTACTg < 1:646544/99‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑GCAAACACTGCGAGAGCAGATTACCCCGCCTTAACCGCTTTACCCTTCAACAATTTCCGCACCCATAACCGATTCGGGTTTAACGCTGCCAGCGTACTG > 100/1‑99 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |