| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 146 | = 10176 | 0 (0.000) | 27 (0.470) | 17/186 | 3.0 | 54.5% | intergenic (–/–) | –/– | –/– |
| ? | 54 | 18442 = | 45 (0.800) | intergenic (–/–) | –/– | –/– | |||||
TAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATG > 54/18342‑18540 | gtgaaatcgagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccgga > 1:218184‑M2/101‑101 (MQ=255)gtgaaatcgagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccgga > 1:313636‑M2/101‑101 (MQ=255)gtgaaatcgagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccgga > 1:1152124‑M2/101‑101 (MQ=255) tgaaatcgagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggAt < 1:107242‑M2/2‑1 (MQ=255) aaatcgagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATgc < 2:1611020‑M2/4‑1 (MQ=255) tcgagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATgcggc < 1:936977‑M2/7‑1 (MQ=255) tcgagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATgcggc < 2:1538911‑M2/7‑1 (MQ=255) tGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATgcggcg > 1:53999/1‑101 (MQ=255) cgagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATgcggcg < 2:1358902‑M2/8‑1 (MQ=255) gagaaggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGt > 1:1343175‑M2/93‑101 (MQ=255) gaagaaTGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTg < 1:755455/101‑1 (MQ=255) aagaaTGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGa > 1:1313113/1‑101 (MQ=255) aagaaTGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGa > 2:32450/1‑101 (MQ=255) aggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAAc < 1:840440‑M2/13‑1 (MQ=255) aggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAAc < 2:682580‑M2/13‑1 (MQ=255) aggcagaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAAc < 2:273748‑M2/13‑1 (MQ=255) aTGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGc > 2:405233/1‑101 (MQ=255) agaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCt < 2:982813‑M2/17‑1 (MQ=255) agaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCt > 1:1207643‑M2/85‑101 (MQ=255) agaagcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCt > 1:531751‑M2/85‑101 (MQ=255) tCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCtt < 2:829390/101‑1 (MQ=255) tCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCtt < 2:240992/101‑1 (MQ=255) cAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTa < 2:138725/101‑1 (MQ=255) cAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTa > 2:429113/1‑101 (MQ=255) agcgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTAt < 2:590137‑M2/20‑1 (MQ=255) aGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTAt < 1:177733/101‑1 (MQ=255) gTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATc > 1:384068/1‑101 (MQ=255) tATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATcc < 2:560409/101‑1 (MQ=255) cgaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATcc < 1:83531‑M2/22‑1 (MQ=255) gaaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATCCg > 1:816853‑M2/79‑101 (MQ=255) aaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATCCgg > 2:1039218‑M2/78‑101 (MQ=255) aaaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccagATGCGGCGTGAACGCCTTATCCgg > 2:684400‑M2/78‑101 (MQ=255) aaaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATCCGGc > 1:465738‑M2/77‑101 (MQ=255) aaaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATCCGGCa > 1:1560556‑M2/76‑101 (MQ=255) aaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATCCGGCAt > 1:375555‑M2/75‑101 (MQ=255) aaagagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATCCGGCAt > 1:408245‑M2/75‑101 (MQ=255) agagagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATCCGGcatga < 1:1611651‑M2/29‑3 (MQ=255) gcgcGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTta < 2:260048/101‑1 (MQ=255) cagcgTTCTTAATAGTGGCAACTAGCGGGCCGGGGGCAATTACTCTCGACCGAAGTTCGTAAAGATGCCGAATGCGGCGTGAACGCCTTGTCAGGCCTTta < 2:1355121/99‑1 (MQ=16) gagtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATCcggcatgaaaa > 1:767868‑M2/70‑96 (MQ=255) cgTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTtaata > 1:814896/1‑101 (MQ=255) agtgaagaagggatataatctcttttgaactttcatattgtagacaacgtaggctttgttcatgccggATGCGGCGTGAACGCCTTATccggcatgaaaac < 1:205382‑M2/33‑7 (MQ=255) gTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTtaataa < 2:315400/101‑1 (MQ=255) ttCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATaaa < 2:294950/101‑1 (MQ=255) tGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTAc < 1:1418943/101‑1 (MQ=255) cTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAg > 2:231715/1‑101 (MQ=255) tATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGc < 2:473619/101‑1 (MQ=255) tATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGc < 1:12906/101‑1 (MQ=255) ttGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCa < 2:379111/101‑1 (MQ=255) ttGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGCGAAAGCCCTATCCGGCATTTAATAAATTACAGGCa > 1:1164877/1‑101 (MQ=255) tGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCAc < 2:430670/101‑1 (MQ=255) tGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCAc < 1:6038/101‑1 (MQ=255) aaTTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTa < 2:597066/101‑1 (MQ=255) ttACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTTTAcc < 1:1060701/101‑1 (MQ=255) ttACCGGGCCGGGGGCAATTTCTCTCGATCGGAGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTAcc < 2:783003/101‑1 (MQ=255) cgggGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGAc < 2:1492418/101‑1 (MQ=255) ggggCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACAt < 1:183547/101‑1 (MQ=255) ggCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACAtct < 1:1000197/101‑1 (MQ=255) cAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATctct < 1:1078723/101‑1 (MQ=255) tttCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGaa < 2:1089630/101‑1 (MQ=255) ttCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAg < 1:1333223/101‑1 (MQ=255) tcGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAgttgtt > 2:769955/1‑101 (MQ=255) cGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGttgttg > 1:536730/1‑101 (MQ=255) gATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGa > 1:1564001/1‑101 (MQ=255) tCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGAtt > 1:1084733/1‑101 (MQ=255) cGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTcccc < 2:1313107/101‑1 (MQ=255) cGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTcccc < 2:384063/101‑1 (MQ=255) gTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCt > 1:1678679/1‑101 (MQ=255) gTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCt > 2:880782/1‑101 (MQ=255) ttAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTg < 2:832791/101‑1 (MQ=255) gAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGc > 1:1714683/1‑101 (MQ=255) aaaGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCt < 2:1045008/101‑1 (MQ=255) ggATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATg < 2:536725‑M2/99‑1 (MQ=255) ggATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATg > 2:1085852‑M2/3‑101 (MQ=255) | TAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATG > 54/18342‑18540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |