| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 146 | = 10176 | 0 (0.000) | 27 (0.470) | 17/186 | 3.0 | 54.5% | intergenic (–/–) | –/– | –/– |
| ? | 54 | 18442 = | 45 (0.800) | intergenic (–/–) | –/– | –/– | |||||
CGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 146/10076‑10176 | cGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG > 1:1355047‑M1/1‑101 (MQ=255) gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGa > 1:1152124‑M1/1‑100 (MQ=255) gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGa > 1:313636‑M1/1‑100 (MQ=255) gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGa > 1:218184‑M1/1‑100 (MQ=255) tGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGat < 1:107242‑M1/101‑3 (MQ=255) aaaTCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgc < 2:1611020‑M1/101‑5 (MQ=255) tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggc < 1:936977‑M1/101‑8 (MQ=255) tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggc < 2:1538911‑M1/101‑8 (MQ=255) cGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcg < 2:1358902‑M1/101‑9 (MQ=255) gagaAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgt > 1:1343175‑M1/1‑92 (MQ=255) aGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaac < 2:682580‑M1/101‑14 (MQ=255) aGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaac < 2:273748‑M1/101‑14 (MQ=255) aGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaac < 1:840440‑M1/101‑14 (MQ=255) aGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgcct > 1:531751‑M1/1‑84 (MQ=255) aGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgcct < 2:982813‑M1/101‑18 (MQ=255) aGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgcct > 1:1207643‑M1/1‑84 (MQ=255) aGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttat < 2:590137‑M1/101‑21 (MQ=255) cGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatcc < 1:83531‑M1/101‑23 (MQ=255) gAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccg > 1:816853‑M1/1‑78 (MQ=255) aaaaaaGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccgg > 2:1039218‑M1/1‑77 (MQ=255) aaaaaaGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCAGatgcggcgtgaacgccttatccgg > 2:684400‑M1/1‑77 (MQ=255) aaaaaGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccggc > 1:465738‑M1/1‑76 (MQ=255) aaaaGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccggca > 1:1560556‑M1/1‑75 (MQ=255) aaaGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccggcat > 1:375555‑M1/1‑74 (MQ=255) aaaGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccggcat > 1:408245‑M1/1‑74 (MQ=255) agagagTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccggcatga < 1:1611651‑M1/101‑30 (MQ=255) gagTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccggcatgaaaa > 1:767868‑M1/1‑69 (MQ=255) agTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGatgcggcgtgaacgccttatccggcatgaaaac < 1:205382‑M1/101‑34 (MQ=255) ggatgcggcgtgaacgccttatccggcatttaataaattacagccactctacccgcaacgacatctctgaagttgttgattcccctggtgctagcgcaatg < 2:536725‑M1/101‑100 (MQ=255) ggatgcggcgtgaacgccttatccggcatttaataaattacagccactctacccgcaacgacatctctgaagttgttgattcccctggtgctagcgcaatg > 2:1085852‑M1/1‑2 (MQ=255) | CGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 146/10076‑10176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |