New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 146 | = 10176 | 0 (0.000) | 27 (0.470) | 17/186 | 3.0 | 54.5% | intergenic (–/–) | –/– | –/– |
? | 54 | 18442 = | 45 (0.800) | intergenic (–/–) | –/– | –/– |
TGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 146/10070‑10176 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccggATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATG > 54/18442‑18540 TGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCA < 2:1606896/101‑1 TGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCA < 2:1533473/101‑1 GGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCAT < 2:972246/101‑1 GGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCAT < 1:1308536/101‑1 GGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCAT < 2:1348064/101‑1 GGTATAGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCAT < 2:1176765/101‑1 GTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATG > 1:590142/1‑101 TATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGC > 2:1610428/1‑101 TATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGC > 1:725644/1‑101 ATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCC < 2:1565898/101‑1 ATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCC > 1:286594/1‑101 CGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG > 1:1355047/1‑101 GTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGA > 1:1152124/1‑101 GTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGA > 1:218184/1‑101 GTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGA > 1:313636/1‑101 TGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGAT < 1:107242/101‑1 AAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGC < 2:1611020/101‑1 TCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGC < 2:1538911/101‑1 TCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGC < 1:936977/101‑1 CGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCG < 2:1358902/101‑1 GAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGT > 1:1343175/1‑101 AGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAC < 2:682580/101‑1 AGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAC < 1:840440/101‑1 AGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAC < 2:273748/101‑1 AGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCT < 2:982813/101‑1 AGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCT > 1:1207643/1‑101 AGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCT > 1:531751/1‑101 AGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTAT < 2:590137/101‑1 CGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCC < 1:83531/101‑1 GAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:816853/1‑101 AAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGG > 2:1039218/1‑101 AAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCAGATGCGGCGTGAACGCCTTATCCGG > 2:684400/1‑101 AAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGC > 1:465738/1‑101 AAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCA > 1:1560556/1‑101 AAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCAT > 1:408245/1‑101 AAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCAT > 1:375555/1‑101 AGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATga < 1:1611651/101‑3 GAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATgaaaa > 1:767868/1‑96 AGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATgaaaac < 1:205382/101‑7 GGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATG < 2:536725/101‑1 GGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATG > 2:1085852/1‑101 TGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 146/10070‑10176 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccggATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATG > 54/18442‑18540 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |