Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 2,448,493 IS186 (–) +6 bp intergenic (+24/+21) nupC → / ← yfeA nucleoside (except guanosine) transporter/predicted diguanylate cyclase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2448493 =0 (0.000)68 (1.090) 55/194 0.1 100% intergenic (+24/+26) nupC/yfeA nucleoside (except guanosine) transporter/predicted diguanylate cyclase
?REL606 2772854 = NA (NA)noncoding (1/1343 nt) IS186 repeat region
* ? REL606 = 24484980 (0.000)58 (0.930) 48/194 0.3 100% intergenic (+29/+21) nupC/yfeA nucleoside (except guanosine) transporter/predicted diguanylate cyclase
?REL606 = 2774196 NA (NA)noncoding (1343/1343 nt) IS186 repeat region

Only 100 of 104 total aligned reads displayed.

CGCTGGCGCGGGGAACACAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCC  >  REL606/2772755‑2772949
                                                                                                   |                                                                                               
cGCTGGCGCGGGGAACACAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAAccc                                                                                                >  1:51046/1‑101 (MQ=255)
      cgcgGGGAACACAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg                                                                                          <  1:216539/101‑1 (MQ=255)
      cgcgGGGAACACAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg                                                                                          <  1:109508/101‑1 (MQ=255)
         ggggAACACAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAgcgc                                                                                       >  1:1233153/1‑101 (MQ=255)
         ggggAACACAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGCGGGGAACAACCCCATAAgcgc                                                                                       >  1:1006695/1‑101 (MQ=255)
             aaCACAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc                                                                                   <  1:905895/101‑1 (MQ=255)
              acacAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACt                                                                                  >  1:772785/1‑101 (MQ=255)
                 caGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAGAACCCCCTAAGCGCTAACTTaa                                                                               >  2:318159/1‑101 (MQ=255)
                 caGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTaa                                                                               <  2:82491/101‑1 (MQ=255)
                  aGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAg                                                                              <  2:809207/101‑1 (MQ=255)
                  aGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAg                                                                              <  2:1605955/101‑1 (MQ=255)
                    cTGAGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGGAGACCCTGAACGGGGGGGAAAAAACCCATAAACGCTAACTTAAagg                                                                            >  2:1088792/1‑101 (MQ=255)
                     tGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGt                                                                           >  2:384254/1‑101 (MQ=255)
                       ggCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtg                                                                         <  2:1294404/101‑1 (MQ=255)
                        gCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgt                                                                        <  2:1480109/101‑1 (MQ=255)
                        gCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgt                                                                        <  2:608084/101‑1 (MQ=255)
                        gCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgt                                                                        <  2:377306/101‑1 (MQ=255)
                         cGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgtg                                                                       >  2:508345/1‑101 (MQ=255)
                          gAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTgg                                                                      <  2:1266465/101‑1 (MQ=255)
                          gAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTgg                                                                      <  2:154478/101‑1 (MQ=255)
                             aTTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTAt                                                                   <  2:1475328/101‑1 (MQ=255)
                             aTTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTAt                                                                   <  2:20627/101‑1 (MQ=255)
                              ttttGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt                                                                  <  2:275773/101‑1 (MQ=255)
                              ttttGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt                                                                  <  2:1475945/101‑1 (MQ=255)
                              ttttGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt                                                                  >  2:689635/1‑101 (MQ=255)
                                ttGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc                                                                <  2:952095/101‑1 (MQ=255)
                                 tGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg                                                               >  1:914245/1‑101 (MQ=255)
                                   aTTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGcc                                                             <  2:595555/101‑1 (MQ=255)
                                     tCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg                                                           <  1:678572/101‑1 (MQ=255)
                                      cATCGCGATGACCGGTTTATCCCCGCTGGAGCGGGGCACACCCTGAACGGAGGGGATAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATCACGCCTGa                                                          >  2:820510/1‑101 (MQ=25)
                                       aTCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGat                                                         >  2:1236590/1‑101 (MQ=255)
                                       aTCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGat                                                         <  2:1085178/101‑1 (MQ=255)
                                          gTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATg                                                      >  2:1355920/1‑101 (MQ=255)
                                          gTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATg                                                      >  1:663611/1‑101 (MQ=255)
                                          gTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATg                                                      >  2:1570196/1‑101 (MQ=255)
                                           tgatgaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGa                                                     >  1:1520267/1‑101 (MQ=255)
                                           tgatgaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGAGAAAAACCCCATAAGCGCTAACTTAACAGGTGTGGTATTACGCCTGTAATGa                                                     >  2:256411/1‑101 (MQ=37)
                                            gatgaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAt                                                    <  1:1201888/101‑1 (MQ=255)
                                             atgaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt                                                   <  2:400957/101‑1 (MQ=255)
                                             atgaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt                                                   <  1:1113360/101‑1 (MQ=255)
                                              tgaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAttt                                                  <  1:686046/101‑1 (MQ=255)
                                              tgaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAttt                                                  >  1:106995/1‑101 (MQ=255)
                                               gaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa                                                 >  2:1080673/1‑101 (MQ=255)
                                                aCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                >  2:513184/1‑101 (MQ=255)
                                                aCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                <  1:1691916/101‑1 (MQ=255)
                                                aCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                >  2:18989/1‑101 (MQ=255)
                                                 ccGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAc                                               <  1:946102/101‑1 (MQ=255)
                                                 ccGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAc                                               >  2:1384901/1‑101 (MQ=255)
                                                   ggTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGt                                             <  1:1130068/101‑1 (MQ=255)
                                                   ggTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGt                                             <  2:1297678/101‑1 (MQ=255)
                                                    gTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTg                                            >  2:566654/1‑101 (MQ=255)
                                                     tttATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc                                           <  1:1720388/101‑1 (MQ=255)
                                                      ttATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGcc                                          >  2:404259/1‑101 (MQ=255)
                                                       tATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg                                         >  1:1530623/1‑101 (MQ=255)
                                                       tATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg                                         >  2:502901/1‑101 (MQ=255)
                                                          ccccGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATg                                      >  1:41212/1‑101 (MQ=255)
                                                           cccGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGa                                     <  1:243667/101‑1 (MQ=255)
                                                            ccGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGaa                                    <  1:170002/101‑1 (MQ=255)
                                                            ccGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGaa                                    <  1:1291212/101‑1 (MQ=255)
                                                            ccGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGaa                                    >  1:117843/1‑101 (MQ=255)
                                                              gCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAtt                                  <  1:513189/101‑1 (MQ=255)
                                                               ntGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGNTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa                                 >  1:1279910/2‑101 (MQ=255)
                                                                    gcgGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACtctc                            <  1:1570202/101‑1 (MQ=255)
                                                                      ggggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc                          >  2:1451353/1‑101 (MQ=255)
                                                                      ggggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc                          >  1:780485/1‑101 (MQ=255)
                                                                      ggggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc                          <  2:1519745/101‑1 (MQ=255)
                                                                         gAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGAt                       >  1:309636/1‑101 (MQ=255)
                                                                         gAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGAt                       >  2:1089408/1‑101 (MQ=255)
                                                                          aaCACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATa                      >  1:753289/1‑101 (MQ=255)
                                                                            cacCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAc                    >  2:29116/1‑101 (MQ=255)
                                                                             acCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACt                   >  1:237727/1‑101 (MQ=255)
                                                                             acCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACt                   <  1:596643/101‑1 (MQ=255)
                                                                             acCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACt                   <  2:1267604/101‑1 (MQ=255)
                                                                              cccTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTg                  >  1:756838/1‑101 (MQ=255)
                                                                                cTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                <  2:212250/101‑1 (MQ=255)
                                                                                cTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                <  1:365465/101‑1 (MQ=255)
                                                                                 tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTc               <  2:847246/101‑1 (MQ=255)
                                                                                 tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTc               <  1:1384907/101‑1 (MQ=255)
                                                                                 tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTc               >  2:1478980/1‑101 (MQ=255)
                                                                                  gAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa              <  1:391307/101‑1 (MQ=255)
                                                                                  gAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa              <  2:499879/101‑1 (MQ=255)
                                                                                   aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg             >  1:1508390/1‑101 (MQ=255)
                                                                                     cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCa           >  2:513632/1‑101 (MQ=40)
                                                                                     cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCa           >  2:1530130/1‑101 (MQ=40)
                                                                                     cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCa           <  2:57212/101‑1 (MQ=40)
                                                                                       gTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAt         <  2:772780/101‑1 (MQ=38)
                                                                                       gTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAt         >  1:1089783/1‑101 (MQ=38)
                                                                                        tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCTAtt        <  1:5877/101‑1 (MQ=38)
                                                                                        tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAtt        <  1:5878/101‑1 (MQ=38)
                                                                                          gggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCt      >  2:1446266/1‑101 (MQ=35)
                                                                                          gggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCt      <  1:1355926/101‑1 (MQ=35)
                                                                                          gggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCt      <  1:77022/101‑1 (MQ=35)
                                                                                           ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg     >  2:896341/1‑101 (MQ=33)
                                                                                           ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg     >  2:147131/1‑101 (MQ=33)
                                                                                           ggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg     <  2:1431572/101‑1 (MQ=33)
                                                                                            gAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTgg    <  1:1359989/101‑1 (MQ=32)
                                                                                            gAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTgg    <  2:41212/101‑1 (MQ=32)
                                                                                             aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGc   <  1:508350/101‑1 (MQ=31)
                                                                                             aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGc   >  2:576226/1‑101 (MQ=31)
                                                                                              aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGcc  >  2:1356264/1‑101 (MQ=11)
                                                                                                   |                                                                                               
CGCTGGCGCGGGGAACACAGCTGGGCGAAATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCC  >  REL606/2772755‑2772949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.