| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,916,224 | IS1 (–) +9 bp | [pykA] | [pykA] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1916224 = | 1 (0.020) | 62 (0.960) | 50/200 | 0.3 | 98.3% | intergenic (+127/‑1) | yebK/pykA | predicted DNA‑binding transcriptional regulator/pyruvate kinase |
| ? | REL606 | 1973272 = | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 1916232 | 1 (0.020) | 68 (1.060) | 53/200 | 0.2 | 98.4% | coding (8/1443 nt) | pykA | pyruvate kinase |
| ? | REL606 | 2034326 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
AATATAACCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT > REL606/2034227‑2034425 | aaTATAACCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCgg < 1:209637/101‑1 (MQ=255)aaTATAACCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCgg > 2:855565/1‑101 (MQ=255)aaTATAACCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCgg > 2:1445598/1‑101 (MQ=255) atatAACCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGt > 2:19177/1‑101 (MQ=255) atatAACCGGAATAAGAGGTGAGATCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGTAAGAAGTCTAACAAATATCCGGt < 2:775882/101‑1 (MQ=255) tataACCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTa > 2:48632/1‑101 (MQ=255) ataACCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTaa > 1:871383/1‑101 (MQ=255) aaCCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATg > 2:703788/1‑101 (MQ=255) aaCCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATg > 2:1254335/1‑101 (MQ=255) ccGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGAc < 1:1303462/101‑1 (MQ=255) ggAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTc > 1:814971/1‑101 (MQ=255) gAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTcc > 2:713341/1‑101 (MQ=255) gAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTcc > 1:1477581/1‑101 (MQ=255) attagagGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCaa > 1:1426465/4‑101 (MQ=255) aTAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCaa > 2:678038/1‑101 (MQ=255) aTAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCaa < 2:66736/101‑1 (MQ=255) aTAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCaa > 2:715212/1‑101 (MQ=255) aaGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACt > 1:1503833/1‑101 (MQ=255) agagGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACtt < 2:948579/101‑1 (MQ=255) ggcgAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTAtt > 2:852560/4‑101 (MQ=255) gTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTg < 1:495173/101‑1 (MQ=255) gAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGAt < 1:763464/101‑1 (MQ=255) gAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGAt < 2:1156807/101‑1 (MQ=255) cATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAgtgt > 2:586402/1‑101 (MQ=255) aTAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTGACAAATATCCGGTAATGACTCCAACTTATTGATAGTGtt > 2:422972/1‑101 (MQ=255) aTAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGtt > 1:425442/1‑101 (MQ=255) aTAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGtt > 1:1180477/1‑101 (MQ=255) aTAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGtt > 1:1487438/1‑101 (MQ=255) aTAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGtt > 2:102792/1‑101 (MQ=255) aTAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGtt > 1:1134571/1‑101 (MQ=255) aTAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGtt > 1:161146/1‑101 (MQ=255) aaaaaTCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGtttt > 1:1706023/1‑101 (MQ=255) aaaTCTCCTGATAACTTTTTTATATATATAGCCACGAAAAGTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCGACTTATTGATAGTGTTTTAg < 2:409819‑M1/101‑2 (MQ=255) aaTCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgt > 1:953309‑M1/1‑99 (MQ=255) aaTCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgt < 1:914870‑M1/101‑3 (MQ=255) aTCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtt > 1:1029915‑M1/1‑98 (MQ=255) ccTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgag < 1:224285‑M1/101‑8 (MQ=255) cTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagc < 1:715217‑M1/101‑9 (MQ=255) gATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcag > 2:799059‑M1/1‑91 (MQ=255) gATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcag > 2:105695‑M1/1‑91 (MQ=255) aTAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcagg < 1:1510856‑M1/101‑12 (MQ=255) aTAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcagg < 2:1173601‑M1/101‑12 (MQ=255) aTAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcagg < 2:793598‑M1/101‑12 (MQ=255) aTAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcagg < 1:1445604‑M1/101‑12 (MQ=255) aaCTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcg > 2:570464‑M1/1‑88 (MQ=255) cTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggt > 1:910410‑M1/1‑86 (MQ=255) cTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGCTTTAgtttgagcaggcggt > 1:147679‑M1/1‑86 (MQ=255) tttATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaac < 1:325727‑M1/101‑20 (MQ=255) ttATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaacc > 1:959199‑M1/1‑81 (MQ=255) tatatatataGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccc > 1:852611‑M1/1‑80 (MQ=255) atataGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaa > 2:991595‑M1/1‑75 (MQ=255) atataGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcaggtaactccgcaa > 2:1334585‑M1/1‑75 (MQ=255) ataGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaag < 2:1182486‑M1/101‑29 (MQ=255) taGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagc < 1:1326990‑M1/101‑30 (MQ=255) gCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCCGCTTATTGATAGTGTTTTAgtttgagcaggcgatgaaccccggaaagcgg < 2:1078383‑M1/101‑32 (MQ=255) gCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcgg < 2:1180472‑M1/101‑32 (MQ=255) ccACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggc > 1:902094‑M1/1‑69 (MQ=255) ccACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggc < 2:814966‑M1/101‑33 (MQ=255) ccACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggc > 2:285918‑M1/1‑69 (MQ=255) cGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtg < 1:997890‑M1/101‑36 (MQ=255) gAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgt > 1:1189818‑M1/1‑65 (MQ=255) aaaaCTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtc > 2:871948‑M1/1‑64 (MQ=255) aaCTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcat > 2:1245982‑M1/1‑62 (MQ=255) aaCTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcat > 1:379150‑M1/1‑62 (MQ=255) cTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatac < 2:1000293‑M1/101‑42 (MQ=255) tAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcataca < 1:19177‑M1/101‑43 (MQ=255) aGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacag < 2:425437‑M1/101‑44 (MQ=255) aGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacag > 2:1705256‑M1/1‑58 (MQ=255) tGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcg > 1:327500‑M1/1‑56 (MQ=255) ggAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggc > 2:331996‑M1/1‑54 (MQ=255) ggAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggc > 2:1573444‑M1/1‑54 (MQ=255) aagaagTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcac > 1:756440‑M1/1‑52 (MQ=255) aagaagTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcac > 2:1111518‑M1/1‑52 (MQ=255) gaagTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcacca < 1:1191289‑M1/101‑52 (MQ=255) agTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccacc > 2:784032‑M1/1‑48 (MQ=255) cTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggt > 2:1388440‑M1/1‑45 (MQ=255) cTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgccatacagcggcaccaccggt > 1:943218‑M1/1‑45 (MQ=255) aaCAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggtac < 2:953304‑M1/101‑59 (MQ=255) aaCAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggtac < 1:1362025‑M1/101‑59 (MQ=255) aaCAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggtac < 2:1134566‑M1/101‑59 (MQ=255) aaCAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggtac > 2:87647‑M1/1‑43 (MQ=255) aaCAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggtac < 2:902089‑M1/101‑59 (MQ=255) aCAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggtacg < 1:1549899‑M1/101‑60 (MQ=255) atCCGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggtacgccattc > 1:1350848‑M1/1‑36 (MQ=255) cGGTAATGACTCCAACTTATTGATAGTGTTTTAgtttgagcaggcggttaaccccggaaagcggcgtgtcatacagcggcaccaccggtacgccattcatc > 2:1049011‑M1/1‑33 (MQ=255) | AATATAACCGGAATAAGAGGTGAGCTCATAAAAATCTCCTGATAACTTTTTTATATATATAGCCACGAAAACTAGTGGGAAGAAGTCTAACAAATATCCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT > REL606/2034227‑2034425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |