Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 929,574 IS150 (+) +3 bp coding (946‑948/1653 nt) hcp ← hydroxylamine reductase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 666130NA (NA)60 (0.950) 51/196 0.2 96.7% noncoding (1443/1443 nt) IS150 repeat region
?REL606 929574 = 2 (0.030)coding (948/1653 nt) hcp hydroxylamine reductase
* ? REL606 = 9295762 (0.030)71 (1.100) 52/200 0.2 97.2% coding (946/1653 nt) hcp hydroxylamine reductase
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region

Only 100 of 137 total aligned reads displayed.

AAATCATCACCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCGACCAGATGCTTGAATTTACGCAG  >  REL606/929476‑929675
                                                                                                    |                                                                                                   
agaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGtt                                                                                                     <  2:811721‑M2/3‑1 (MQ=255)
aaaTCATCACCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCTATGATGCAGtt                                                                                                     >  2:1211732/1‑101 (MQ=255)
 aaTCATCACCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTt                                                                                                    >  2:868222‑M1/1‑100 (MQ=255)
 aaTCATCACCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTt                                                                                                    >  2:1363988‑M1/1‑100 (MQ=255)
  aattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCg                                                                                                   >  1:384031‑M2/97‑101 (MQ=255)
     tagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAgg                                                                                                >  2:1045266‑M2/94‑101 (MQ=255)
     ctcacCGTCCAGATGACCCACTCCAGGCCAGCCAACAATGCTGCCGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtac                                                                                                <  2:1451436‑M1/100‑6 (MQ=255)
     atcaCCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtct                                                                                                <  1:1202982‑M1/101‑6 (MQ=255)
     atcaCCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtac                                                                                                <  1:1462725‑M1/101‑6 (MQ=255)
     atcaCCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtac                                                                                                <  2:641858‑M1/101‑6 (MQ=255)
      tcaCCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtact                                                                                               <  2:1336256‑M1/101‑7 (MQ=255)
         ctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGtcat                                                                                            >  1:481750‑M2/90‑101 (MQ=255)
         ctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGtcat                                                                                            <  1:1279005‑M2/12‑1 (MQ=255)
           gTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacc                                                                                          >  1:917874‑M1/1‑90 (MQ=255)
               ttaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGAt                                                                                      <  2:1478361‑M2/18‑1 (MQ=255)
               aGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccatt                                                                                      >  1:1184325‑M1/1‑86 (MQ=255)
                 aTGACGCACGCCAGTCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcccccagttt                                                                                    <  2:1613648‑M1/101‑18 (MQ=255)
                 aTGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccatttt                                                                                    >  1:1614884‑M1/1‑84 (MQ=255)
                 aTGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccatttt                                                                                    <  2:1309465‑M1/101‑18 (MQ=255)
                  aaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATggg                                                                                   >  1:1328237‑M2/81‑101 (MQ=255)
                  aaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATggg                                                                                   <  1:217360‑M2/21‑1 (MQ=255)
                      gtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCa                                                                               <  1:1111356‑M2/25‑1 (MQ=255)
                      gcacgcCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttgg                                                                               <  1:1558984‑M1/101‑23 (MQ=255)
                       tctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAg                                                                              <  1:53880‑M2/26‑1 (MQ=255)
                        ctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAgg                                                                             >  1:561332‑M2/75‑101 (MQ=255)
                        ctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAgg                                                                             >  2:838526‑M2/75‑101 (MQ=255)
                        acgcCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggac                                                                             <  1:1495039‑M1/101‑25 (MQ=255)
                          ggctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGa                                                                           <  2:123607‑M2/29‑1 (MQ=255)
                           ccaggccagCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgat                                                                          <  2:1299812‑M1/101‑28 (MQ=255)
                           actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGaa                                                                          >  1:1454521‑M2/72‑101 (MQ=255)
                            ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGaaa                                                                         <  1:449720‑M2/31‑1 (MQ=255)
                            ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGaaa                                                                         >  1:1401889‑M2/71‑101 (MQ=255)
                              ggccagCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaa                                                                       <  1:1679543‑M1/101‑31 (MQ=255)
                                ccagccaACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaat                                                                     <  2:189833‑M1/101‑33 (MQ=255)
                                aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAg                                                                     <  1:679286‑M2/35‑1 (MQ=255)
                                 cagccaACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatg                                                                    <  1:868227‑M1/101‑34 (MQ=255)
                                 cagccaACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatg                                                                    >  1:399800‑M1/1‑68 (MQ=255)
                                    gaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGaa                                                                 >  2:1118445‑M2/63‑101 (MQ=255)
                                    ccaACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaa                                                                 <  1:1293656‑M1/101‑37 (MQ=255)
                                    ccaACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaa                                                                 >  1:100964‑M1/1‑65 (MQ=255)
                                     caacaaTGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaat                                                                >  2:956175‑M1/1‑64 (MQ=255)
                                     aatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAAc                                                                <  2:481745‑M2/40‑1 (MQ=255)
                                      atatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACt                                                               >  1:1530411‑M2/61‑101 (MQ=255)
                                       acaaTGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcccccattttgttggacgatgaaatggaatag                                                              <  1:261765‑M1/101‑40 (MQ=255)
                                        caaTGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagc                                                             >  2:542194‑M1/1‑61 (MQ=255)
                                        caaTGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagc                                                             <  1:1409559‑M1/101‑41 (MQ=255)
                                               gcGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat                                                      <  1:1616171‑M1/101‑48 (MQ=255)
                                                cGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata                                                     >  2:384593‑M1/1‑53 (MQ=255)
                                                cGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata                                                     >  1:488927‑M1/1‑53 (MQ=255)
                                                 gggTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat                                                    <  1:1522012‑M1/101‑50 (MQ=255)
                                                 agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGa                                                    >  2:116684‑M2/50‑101 (MQ=255)
                                                  ggTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg                                                   >  1:1341866‑M1/1‑51 (MQ=255)
                                                    cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTc                                                 <  2:873511‑M2/55‑1 (MQ=255)
                                                     ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCt                                                >  2:1604428‑M2/46‑101 (MQ=255)
                                                     ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCt                                                >  2:1098708‑M2/46‑101 (MQ=255)
                                                     ccAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca                                                >  2:716053‑M1/1‑48 (MQ=255)
                                                       aGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa                                              >  2:825498‑M1/1‑46 (MQ=255)
                                                        tatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGcc                                             >  1:1625753‑M2/43‑101 (MQ=255)
                                                        tatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGcc                                             <  2:337903‑M2/59‑1 (MQ=255)
                                                         atgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCa                                            <  1:1022978‑M2/60‑1 (MQ=255)
                                                         aTACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagc                                            <  1:883853‑M1/101‑58 (MQ=255)
                                                             ctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCg                                        >  1:1455794‑M2/38‑101 (MQ=255)
                                                               cgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCt                                      <  1:1128862‑M2/66‑1 (MQ=255)
                                                               cgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCt                                      <  2:1333553‑M2/66‑1 (MQ=255)
                                                                cGTCATAAGGGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaata                                     <  2:1202599‑M1/101‑65 (MQ=255)
                                                                 gTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac                                    <  1:1316009‑M1/101‑66 (MQ=255)
                                                                  tCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacc                                   >  1:1688585‑M1/1‑35 (MQ=255)
                                                                  tCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacc                                   >  1:743331‑M1/1‑35 (MQ=255)
                                                                  gtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGcc                                   >  1:825734‑M2/33‑101 (MQ=255)
                                                                  gtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGcc                                   >  1:1093273‑M2/33‑101 (MQ=255)
                                                                    aTAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct                                 >  1:861799‑M1/1‑33 (MQ=255)
                                                                    aTAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct                                 >  1:1373531‑M1/1‑33 (MQ=255)
                                                                    aTAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct                                 >  2:499834‑M1/1‑33 (MQ=255)
                                                                    aTAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct                                 >  1:930019‑M1/1‑33 (MQ=255)
                                                                    aTAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct                                 >  1:186604‑M1/1‑33 (MQ=255)
                                                                      aactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAg                               <  1:1705506‑M2/73‑1 (MQ=255)
                                                                       aGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                              <  1:542199‑M1/101‑72 (MQ=255)
                                                                        gcgcCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg                             <  1:246648‑M1/101‑73 (MQ=255)
                                                                        ctgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGtt                             <  2:1271559‑M2/75‑1 (MQ=255)
                                                                        ctgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGtt                             <  1:1445383‑M2/75‑1 (MQ=255)
                                                                        ctgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGtt                             >  2:333395‑M2/27‑101 (MQ=255)
                                                                          gtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTAc                           >  1:1155423‑M2/25‑101 (MQ=255)
                                                                          gcCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa                           >  2:72259‑M1/1‑27 (MQ=255)
                                                                            cTACGGTTGGGTCGATGATGCAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCg                         >  1:835252/1‑101 (MQ=255)
                                                                              aCGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc                       >  2:834362‑M1/1‑23 (MQ=255)
                                                                               actttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCGAcc                      <  2:199664‑M2/82‑1 (MQ=255)
                                                                                      ggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCGACCAGATGCt               <  2:1648737‑M2/89‑1 (MQ=255)
                                                                                       tCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag              <  2:917869‑M1/101‑88 (MQ=255)
                                                                                       gggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCGACCAGATGCtt              >  1:770962‑M2/12‑101 (MQ=255)
                                                                                         gatgatGCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc            >  1:1213009‑M1/1‑12 (MQ=255)
                                                                                           tgatgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgt          >  1:787029‑M1/1‑10 (MQ=255)
                                                                                              ttcaGATCGAGTTCATCACGATGGGGCCAGGGAACCGAGCGAACTCCACTTTCTGATTCTGCCCGCCGCTGCCGTAGTTACCGACCAGATGCTTGAATTTa       <  1:592807‑M2/97‑1 (MQ=255)
                                                                                              tgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa       <  2:399795‑M1/101‑95 (MQ=255)
                                                                                              tacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCGACCAGATGCTTGAATTTa       <  2:825729‑M2/97‑1 (MQ=255)
                                                                                               gCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat      >  1:1536648‑M1/1‑6 (MQ=255)
                                                                                               gCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat      <  2:1614878‑M1/101‑96 (MQ=255)
                                                                                               gCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat      <  2:930014‑M1/101‑96 (MQ=255)
                                                                                                caGTTCGAGGTCATCACGATGGGGCCAGCGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCGACCAGATGCTTGAATTTACg     <  2:1408244‑M2/99‑1 (MQ=255)
                                                                                                cAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatc     <  2:1373525‑M1/101‑97 (MQ=255)
                                                                                                  gTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCGACCAGATGCTTGAATTTACGCa   <  2:295135/101‑1 (MQ=255)
                                                                                                    |                                                                                                   
AAATCATCACCGTCCAGATGACGCACGCCAGGCCAGCCAACAATGCTGCGGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTGATTCTGCCAGCCGCTGCCGTAGTTACCGACCAGATGCTTGAATTTACGCAG  >  REL606/929476‑929675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.