| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,522,900 | IS150 (–) +3 bp | coding (255‑257/2019 nt) | hyfB → | NADH dehydrogenase subunit N |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2522900 = | 0 (0.000) | 72 (1.120) | 55/200 | 0.2 | 100% | coding (255/2019 nt) | hyfB | NADH dehydrogenase subunit N |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 2522902 | 0 (0.000) | 92 (1.430) | 65/200 | 0.0 | 100% | coding (257/2019 nt) | hyfB | NADH dehydrogenase subunit N |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
AAAGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2522996‑2522900‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA > REL606/3651091‑3651184 AAAGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTA > 1:3606/1‑101AAAGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTA < 1:523072/101‑1AAAGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTA < 2:627130/101‑1 AAGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTAC > 2:228801/1‑101 AGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACT > 1:111261/1‑101 AGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACT < 2:1462655/101‑1 AGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACT > 1:1226422/1‑101 AGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGAGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACT > 1:263790/1‑101 GAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTG < 1:1133866/101‑1 AAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGC > 2:666300/1‑101 CCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCC > 1:177051/1‑101 ATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCAT > 2:906791/1‑101 CGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTT < 2:1121999/101‑1 CGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGT > 1:1394816/1‑101 GCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTT > 2:703231/1‑101 CCTTTGCCCTCGTATTCGCGCCTATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGA > 2:1193171/1‑101 CTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGAT < 2:221838/101‑1 CTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGAT < 1:1637609/101‑1 TTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATG < 2:720731/101‑1 TTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATG < 1:886681/101‑1 TTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGA < 1:1622658/101‑1 TGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAA > 2:458335/1‑101 CTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 2:1303100/1‑101 CTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:347654/1‑101 CGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 2:713255/101‑1 GTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 2:1078463/101‑1 ATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 2:512625/1‑101 ATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:603352/1‑101 GCGCTTATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC < 2:228396/101‑1 GCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:1685115/101‑1 GCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA > 2:1203799/1‑101 CATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 2:1014756/1‑101 ATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 2:69229/1‑101 ATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:1716984/1‑101 ATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 2:1053091/101‑1 TATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 2:882151/1‑101 ATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 2:336609/101‑1 ATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 2:210969/101‑1 ATAAGTCAATGAATAGAGAGAACAAACAACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 2:645218/101‑1 CAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAA < 1:1303106/101‑1 ATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGC > 2:89862/1‑101 ATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGC > 2:962882/1‑101 AATAGAGAGAACAAGCCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA < 2:1700534/101‑1 TAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA > 1:333147/1‑101 AGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT < 2:1213579/101‑1 AGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT < 1:1044829/101‑1 AGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT < 1:725284/101‑1 AGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAC > 1:686715/1‑101 AGAGAACAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAC > 2:442259/1‑101 CAAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTT > 1:615972/1‑101 AAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG < 2:776024/101‑1 AAACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG > 1:491360/1‑101 ACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA > 1:1071659/1‑101 ACCACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA < 1:350192/101‑1 CACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA > 1:434315/1‑101 gCCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG > 1:1113175/2‑101 ACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG < 2:975137/101‑1 ACCACCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG > 2:858141/1‑101 CCAGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCC > 1:991972/1‑101 AGCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTT > 1:525617/1‑101 GCAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTG < 1:531538/101‑1 CAAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGA < 2:347654/101‑1 AAGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAA < 1:1602899/101‑1 AAGGAGATAACCAGATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAA > 1:1409690/1‑101 AGGAGATAACCAGCTGTACTGCCCCCATTTTGTTGGACGATGAAAAGGAATAGCCCCTAATATGTCAAAGCCAAAATTCCCTTTTGAACAGCGCCTCGAAG < 2:557136/101‑1 AGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAG < 1:34426/101‑1 AGGAGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAG < 2:991967/101‑1 AGATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCG > 1:873684/1‑101 GATAACCAGCTGTTCTGCACCCATTTTGTTGGACGATGAAATGGAATATCCCCTAATATGTCAAAGCCAAAATTCCCTTTTGAAAAGCGCCTTGAAGTCGT < 1:1233005/101‑1 GATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGT > 2:554641/1‑101 ATAACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTG > 1:1254888/1‑101 AACCAGCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA > 1:1161922/1‑101 AAAGAAGCCCATCGCCGCCGCGCCTTTGCCCTCGTATTCGCGCATATAAGTCAATGAATAGAGAGAACAAACCACCACCAGCAAGGAGATAACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2522996‑2522900‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA > REL606/3651091‑3651184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |