| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,218,697 | IS150 (+) +3 bp | 100% | coding (1209‑1211/1524 nt) | ycgG → | conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 82 (0.890) | 53/78 | NT | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | 1218697 = | 0 (0.000) | coding (1209/1524 nt) | ycgG | conserved inner membrane protein | |||||
| * | ? | REL606 | = 1218699 | 0 (0.000) | 89 (0.940) | 52/80 | NT | 100% | coding (1211/1524 nt) | ycgG | conserved inner membrane protein |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 218 total aligned reads displayed.
CAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGA > REL606/1218647‑1218747 | cAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGgatgat > 1:4209014/1‑51 (MQ=255) aGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGAtt > 1:6698239/1‑51 (MQ=255) cGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTt > 1:7022097‑M1/1‑50 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTc < 1:584100‑M2/4‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCg < 1:144982‑M2/5‑1 (MQ=255) gTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgt > 1:8540465‑M1/1‑48 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCgg > 1:945537‑M2/46‑51 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGt < 1:7517408‑M2/7‑1 (MQ=255) tGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtac > 1:1644423‑M1/1‑46 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTAc < 1:5915227‑M2/9‑1 (MQ=255) gAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtact > 1:3855067‑M1/1‑45 (MQ=255) aaCATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactg > 1:9159667‑M1/1‑44 (MQ=255) aaCATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactg < 1:6945338‑M1/51‑8 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTg < 1:3093565‑M2/11‑1 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTg < 1:6829713‑M2/11‑1 (MQ=255) aCATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgc > 1:2691155‑M1/1‑43 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGc < 1:4162065‑M2/13‑1 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGc < 1:9119797‑M2/13‑1 (MQ=255) aTACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcac > 1:1110468‑M1/1‑41 (MQ=255) aTACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcac < 1:10705824‑M1/51‑11 (MQ=255) aTACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcac < 1:7892389‑M1/51‑11 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTa < 1:10818786‑M2/15‑1 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTa > 1:8322514‑M2/37‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTa < 1:5000608‑M2/15‑1 (MQ=255) aCTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcaccc < 1:6533617‑M1/51‑13 (MQ=255) cTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcaccca < 1:3151303‑M1/51‑14 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTc > 1:9273461‑M2/34‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAg > 1:6095436‑M2/32‑51 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTAc < 1:869593‑M2/16‑1 (MQ=255) tGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttg < 1:8946360‑M1/51‑19 (MQ=255) tGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccatttt < 1:10171944‑M1/50‑18 (MQ=255) gAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgt > 1:2728501‑M1/1‑32 (MQ=255) aaaTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttg > 1:4757783‑M1/1‑30 (MQ=255) aaTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttgg > 1:8909251‑M1/1‑29 (MQ=255) aTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttgga < 1:4420503‑M1/51‑24 (MQ=255) aTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttgga < 1:2752424‑M1/51‑24 (MQ=255) gtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTc < 1:5325784‑M2/27‑1 (MQ=255) gtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTc < 1:8184319‑M2/27‑1 (MQ=255) gtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTc < 1:5343009‑M2/27‑1 (MQ=255) tccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCt < 1:9013141‑M2/28‑1 (MQ=255) ggTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacg > 1:8220390‑M1/1‑26 (MQ=255) ggTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacg < 1:4966475‑M1/51‑26 (MQ=255) ccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt > 1:8060493‑M2/23‑51 (MQ=255) ccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt < 1:5786824‑M2/29‑1 (MQ=255) ccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt > 1:4347115‑M2/23‑51 (MQ=255) ccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt > 1:6010733‑M2/23‑51 (MQ=255) caactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTa > 1:3612992‑M2/22‑51 (MQ=255) caactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTa < 1:2289334‑M2/30‑1 (MQ=255) tttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatg < 1:267178‑M1/51‑29 (MQ=255) tttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatg > 1:1839694‑M1/1‑23 (MQ=255) tttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatg > 1:10394459‑M1/1‑23 (MQ=255) ttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatga > 1:5636180‑M1/1‑22 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa < 1:3555834‑M1/51‑31 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa > 1:3158679‑M1/1‑21 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa > 1:6319623‑M1/1‑21 (MQ=255) ctttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCt < 1:1965595‑M2/33‑1 (MQ=255) ctttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCt > 1:9383268‑M2/19‑51 (MQ=255) tttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCtt < 1:9523175‑M2/34‑1 (MQ=255) ttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTc > 1:10020021‑M2/17‑51 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat < 1:9567345‑M1/51‑33 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat < 1:3282533‑M1/51‑33 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat > 1:1998348‑M1/1‑19 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat > 1:1730111‑M1/1‑19 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat < 1:6443131‑M1/51‑33 (MQ=255) aTCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatgg < 1:3905504‑M1/51‑35 (MQ=255) tCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatgga < 1:10853179‑M1/51‑36 (MQ=255) tCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatgga < 1:7608340‑M1/51‑36 (MQ=255) ggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGa > 1:8264238‑M2/13‑51 (MQ=255) cgcgCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaa < 1:4337903‑M1/51‑37 (MQ=255) gcgcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaat < 1:10760339‑M1/51‑38 (MQ=255) ggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTTATGAcc < 1:10326503‑M2/41‑1 (MQ=255) ggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGAcc < 1:10339995‑M2/41‑1 (MQ=255) cgcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaata < 1:5771769‑M1/51‑39 (MQ=255) gtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCt < 1:3314992‑M2/42‑1 (MQ=255) gcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatag < 1:3721921‑M1/51‑40 (MQ=255) gcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatag > 1:8433824‑M1/1‑12 (MQ=255) gcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatag > 1:7414843‑M1/1‑12 (MQ=255) tcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTg < 1:2338271‑M2/43‑1 (MQ=255) tcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTg < 1:7856348‑M2/43‑1 (MQ=255) cTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaat > 1:7772276‑M1/1‑11 (MQ=255) tGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:4842558‑M1/1‑10 (MQ=255) tGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:8836701‑M1/1‑10 (MQ=255) cagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGc > 1:4918975‑M2/8‑51 (MQ=255) cagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGc < 1:7301333‑M2/44‑1 (MQ=255) ggATGATTTtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:8144080‑M1/1‑9 (MQ=255) agtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCa < 1:4306158‑M2/45‑1 (MQ=255) tacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCata < 1:4061802‑M2/47‑1 (MQ=255) tgatTTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:2556381‑M1/51‑46 (MQ=255) acaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat > 1:2109087‑M2/4‑51 (MQ=255) acaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat < 1:3509006‑M2/48‑1 (MQ=255) gatTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:8653612‑M1/51‑47 (MQ=255) caTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATAtt > 1:10560535‑M2/3‑51 (MQ=255) aTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTg < 1:5717650‑M2/50‑1 (MQ=255) aTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTg < 1:2229966‑M2/50‑1 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:1915190‑M1/1‑3 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:1288413‑M1/51‑49 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:8014474‑M1/51‑49 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:5549721‑M1/1‑3 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:5625708‑M1/51‑49 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:7668726‑M1/51‑49 (MQ=255) | CAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGA > REL606/1218647‑1218747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |