| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,218,697 | IS150 (+) +3 bp | 100% | coding (1209‑1211/1524 nt) | ycgG → | conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 82 (0.890) | 53/78 | NT | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | 1218697 = | 0 (0.000) | coding (1209/1524 nt) | ycgG | conserved inner membrane protein | |||||
| * | ? | REL606 | = 1218699 | 0 (0.000) | 89 (0.940) | 52/80 | NT | 100% | coding (1211/1524 nt) | ycgG | conserved inner membrane protein |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 114 total aligned reads displayed.
CGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1218650‑1218699‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < REL606/2775877‑2775830 CGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTT > 1:7022097/1‑51 GGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTG < 1:4352818/51‑1 GGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTG > 1:1398949/1‑51 GTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGT > 1:8540465/1‑51 TTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTA < 1:2465815/51‑1 TTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTA > 1:2595695/1‑51 TGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTAC > 1:1644423/1‑51 GAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACT < 1:6693367/51‑1 GAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACT > 1:3855067/1‑51 AACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTG > 1:9159667/1‑51 AACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTG < 1:6945338/51‑1 ACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGC > 1:2691155/1‑51 CATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCA > 1:5776307/1‑51 CATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCA > 1:8147798/1‑51 ATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCAC > 1:1110468/1‑51 ATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCAC < 1:10705824/51‑1 ATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCAC < 1:7892389/51‑1 ACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCC > 1:4343297/1‑51 ACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCC < 1:6533617/51‑1 CTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCA > 1:9381954/1‑51 CTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCA < 1:3151303/51‑1 CTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCA < 1:1125018/51‑1 GCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATT < 1:5691147/51‑1 CATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTT < 1:8798444/51‑1 ATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTT < 1:3133118/51‑1 ATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTT < 1:2314200/51‑1 TGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTG < 1:8946360/51‑1 TGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTT < 1:10171944/50‑1 AAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTG > 1:4757783/1‑51 AAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTG < 1:3847365/51‑1 AATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGG > 1:8909251/1‑51 ATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGA < 1:2752424/51‑1 ATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGA < 1:4420503/51‑1 GGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACG > 1:8220390/1‑51 GGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACG > 1:8509458/1‑51 GGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACG < 1:4966475/51‑1 GGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACG > 1:10337404/1‑51 TTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGAT < 1:761475/51‑1 TTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATG > 1:10394459/1‑51 TTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATG > 1:1839694/1‑51 TTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATG < 1:267178/51‑1 TTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGA > 1:4314862/1‑51 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:6319623/1‑51 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA < 1:3555834/51‑1 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA < 1:9496420/51‑1 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:3158679/1‑51 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:5342784/1‑51 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:9567345/51‑1 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:3282533/51‑1 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:7567718/1‑51 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:1998348/1‑51 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:6443131/51‑1 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:4922680/1‑51 CATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:8039479/51‑1 CATCGCGCTGAATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:2704640/1‑51 ATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:3905504/51‑1 TCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA < 1:7608340/51‑1 TCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA < 1:10853179/51‑1 TCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:5960571/1‑51 CGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:4337903/51‑1 CGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 1:2749237/1‑51 GCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 1:6978531/1‑51 GCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:10760339/51‑1 GCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 1:10848662/1‑51 GCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:9199925/51‑1 CGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:5771769/51‑1 CGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:1882396/51‑1 GCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 1:197437/51‑1 GCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 1:3721921/51‑1 GCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:8433824/1‑51 GCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:7414843/1‑51 GCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:3525950/1‑51 CTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:4972834/1‑51 CTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 1:7772276/1‑48 aaagaGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:2130322/6‑51 TGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:6850407/1‑51 TGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:3351697/1‑51 TGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:4842558/1‑51 TGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:8836701/1‑51 agtacATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:4079391/6‑51 GGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:8144080/1‑51 ATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > 1:10362545/1‑51 ATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT < 1:5794215/51‑1 ATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT < 1:10191838/51‑1 TGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:3014990/51‑1 TGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:8086255/51‑1 TGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:2556381/51‑1 TGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA > 1:8673213/1‑51 GATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 1:4884923/1‑51 GATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA < 1:8653612/51‑1 ATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:10067071/1‑51 ATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:5725873/1‑51 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:5549721/1‑51 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:5625708/51‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:2018219/1‑51 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:1915190/1‑51 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:1288413/51‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:8014474/51‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:8214357/51‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:7668726/51‑1 CGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1218650‑1218699‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < REL606/2775877‑2775830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |