| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,218,697 | IS150 (+) +3 bp | 100% | coding (1209‑1211/1524 nt) | ycgG → | conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 82 (0.890) | 53/78 | NT | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | 1218697 = | 0 (0.000) | coding (1209/1524 nt) | ycgG | conserved inner membrane protein | |||||
| * | ? | REL606 | = 1218699 | 0 (0.000) | 89 (0.940) | 52/80 | NT | 100% | coding (1211/1524 nt) | ycgG | conserved inner membrane protein |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 228 total aligned reads displayed.
GCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATT > REL606/1218649‑1218749 | gCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGAttt > 1:6083290/1‑51 (MQ=255) cGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTt > 1:7022097‑M1/1‑50 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTc < 1:2680567‑M2/4‑1 (MQ=255) ggTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtg > 1:1398949‑M1/1‑49 (MQ=255) ggTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtg < 1:6414392‑M1/51‑3 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCg < 1:7870546‑M2/5‑1 (MQ=255) gTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgt > 1:8540465‑M1/1‑48 (MQ=255) ttGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgta > 1:2595695‑M1/1‑47 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTa < 1:315692‑M2/8‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTa > 1:1573531‑M2/44‑51 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTAc > 1:9523712‑M2/43‑51 (MQ=255) gAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtact < 1:6693367‑M1/51‑7 (MQ=255) gAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtact > 1:3855067‑M1/1‑45 (MQ=255) aaCATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactg < 1:6945338‑M1/51‑8 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTg < 1:6829713‑M2/11‑1 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTg > 1:10679352‑M2/41‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTgg < 1:4377382‑M2/12‑1 (MQ=255) cATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgca > 1:5776307‑M1/1‑42 (MQ=255) cATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgca > 1:8147798‑M1/1‑42 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGc < 1:4162065‑M2/13‑1 (MQ=255) aTACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcac > 1:3311552‑M1/1‑41 (MQ=255) aTACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcac < 1:10705824‑M1/51‑11 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCt < 1:1719969‑M2/14‑1 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCt < 1:5625711‑M2/14‑1 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTa > 1:8322514‑M2/37‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTa > 1:3973294‑M2/37‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTa < 1:5000608‑M2/15‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTc > 1:9273461‑M2/34‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCa < 1:604799‑M2/19‑1 (MQ=255) cATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattt < 1:8798444‑M1/51‑17 (MQ=255) tttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAg < 1:10555323‑M2/20‑1 (MQ=255) aTGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccatttt < 1:3133118‑M1/51‑18 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTAc < 1:869593‑M2/16‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTAc < 1:3220723‑M2/16‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAgg < 1:7839439‑M2/21‑1 (MQ=255) tGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttg < 1:8946360‑M1/51‑19 (MQ=255) tGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccatttt < 1:10171944‑M1/50‑18 (MQ=255) taactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAggg < 1:6458488‑M2/22‑1 (MQ=255) actgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCt < 1:7932919‑M2/24‑1 (MQ=255) actgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCt < 1:5597334‑M2/24‑1 (MQ=255) aaaTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttg > 1:4757783‑M1/1‑30 (MQ=255) aaTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttgg > 1:8909251‑M1/1‑29 (MQ=255) tgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCttt > 1:1922945‑M2/26‑51 (MQ=255) gtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTc < 1:5325784‑M2/27‑1 (MQ=255) gtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTc < 1:5343009‑M2/27‑1 (MQ=255) tccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCt < 1:9013141‑M2/28‑1 (MQ=255) ggTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacg > 1:10337404‑M1/1‑26 (MQ=255) ccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt > 1:4347115‑M2/23‑51 (MQ=255) caactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTa > 1:3612992‑M2/22‑51 (MQ=255) caactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTa < 1:2289334‑M2/30‑1 (MQ=255) tttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatg > 1:10394459‑M1/1‑23 (MQ=255) aactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTAt > 1:5675206‑M2/21‑51 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa < 1:9496420‑M1/51‑31 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa < 1:3555834‑M1/51‑31 (MQ=255) ctttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCt > 1:9383268‑M2/19‑51 (MQ=255) ctttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCt < 1:1965595‑M2/33‑1 (MQ=255) tttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCtt < 1:9157500‑M2/34‑1 (MQ=255) tttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCtt < 1:7724202‑M2/34‑1 (MQ=255) ttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTc > 1:10020021‑M2/17‑51 (MQ=255) ttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTc < 1:5869122‑M2/35‑1 (MQ=255) ttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTc < 1:7513358‑M2/35‑1 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat > 1:1998348‑M1/1‑19 (MQ=255) cATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatg < 1:8039479‑M1/51‑34 (MQ=255) cATCGCGCTGAATGATTTtgtactgcacccattttgttggacgatgaaatg > 1:2704640‑M1/1‑18 (MQ=255) ttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCAt > 1:175498‑M2/15‑51 (MQ=255) tCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatgga < 1:7608340‑M1/51‑36 (MQ=255) ggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGa > 1:8264238‑M2/13‑51 (MQ=255) cgcgCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaa < 1:4337903‑M1/51‑37 (MQ=255) cgcgCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaa > 1:2749237‑M1/1‑15 (MQ=255) gcgcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaat < 1:9199925‑M1/51‑38 (MQ=255) gcgcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaat > 1:10848662‑M1/1‑14 (MQ=255) ggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGAcc > 1:7566769‑M2/11‑51 (MQ=255) cgcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaata < 1:1882396‑M1/51‑39 (MQ=255) cgcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaata < 1:10762419‑M1/51‑39 (MQ=255) gtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCt < 1:1110041‑M2/42‑1 (MQ=255) gtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCt < 1:3314992‑M2/42‑1 (MQ=255) gcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatag < 1:3721921‑M1/51‑40 (MQ=255) tcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTg < 1:9570801‑M2/43‑1 (MQ=255) tcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTg < 1:2338271‑M2/43‑1 (MQ=255) cTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:4972834‑M1/1‑11 (MQ=255) tGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:4842558‑M1/1‑10 (MQ=255) cagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGc > 1:4918975‑M2/8‑51 (MQ=255) cagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGc < 1:7301333‑M2/44‑1 (MQ=255) aaagagattttgtactgcacccattttgttggacgatgaaatggaatagcc > 1:2130322‑M1/6‑10 (MQ=255) agtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCa < 1:4306158‑M2/45‑1 (MQ=255) tacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCata < 1:4061802‑M2/47‑1 (MQ=255) atgatTTtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:10191838‑M1/51‑45 (MQ=255) atgatTTtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:5794215‑M1/51‑45 (MQ=255) tgatTTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:3014990‑M1/51‑46 (MQ=255) tgatTTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:8086255‑M1/51‑46 (MQ=255) acaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat < 1:613865‑M2/48‑1 (MQ=255) acaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat < 1:3509006‑M2/48‑1 (MQ=255) acaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat > 1:2109087‑M2/4‑51 (MQ=255) gatTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:8653612‑M1/51‑47 (MQ=255) aTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTg < 1:5717650‑M2/50‑1 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:8214357‑M1/51‑49 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:1288413‑M1/51‑49 (MQ=255) ttCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAt > 1:5986466/1‑51 (MQ=255) ttCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAt > 1:2383457/1‑51 (MQ=255) ttCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAt < 1:838224/51‑1 (MQ=255) | GCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATT > REL606/1218649‑1218749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |