| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,841,192 | IS150 (+) +3 bp | 100% | coding (389‑391/1074 nt) | recF ← | recombination protein F |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3841192 = | 0 (0.000) | 115 (1.210) | 58/80 | NT | 100% | coding (391/1074 nt) | recF | recombination protein F |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3841194 | 0 (0.000) | 119 (1.320) | 60/76 | NT | 100% | coding (389/1074 nt) | recF | recombination protein F |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 342 total aligned reads displayed.
ATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATT > REL606/3841144‑3841244 | aTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAtt < 1:5428461/51‑1 (MQ=255) tCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTt < 1:3207444‑M1/51‑2 (MQ=255) ccGGGTTCGTTGTGAAAGAATCCCCAGTCGAGGAATGCTCTTCTGTATTtg > 1:5552528‑M1/1‑49 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTgg < 1:6015966‑M1/6‑1 (MQ=255) gggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgta > 1:6569652‑M1/1‑47 (MQ=255) gggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgta < 1:6303352‑M1/51‑5 (MQ=255) ggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtac > 1:8118933‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTgggg < 1:3858240‑M1/8‑1 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgc > 1:431224‑M1/43‑51 (MQ=255) gTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtact < 1:6907443‑M1/51‑7 (MQ=255) ttCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactg > 1:48269‑M1/1‑44 (MQ=255) ttCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactg < 1:7620302‑M1/51‑8 (MQ=255) ttCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactg < 1:2961697‑M1/51‑8 (MQ=255) tCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgc > 1:6533572‑M1/1‑43 (MQ=255) tCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgc < 1:10420634‑M1/51‑9 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgccgc < 1:6846775‑M1/12‑1 (MQ=255) cGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgca > 1:7074753‑M1/1‑42 (MQ=255) gTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcac < 1:5742500‑M1/51‑11 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGccgccg < 1:2289478‑M1/14‑1 (MQ=255) tgtgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcaccc > 1:10307554‑M1/1‑39 (MQ=255) tgtgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcaccc > 1:8186680‑M1/1‑39 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGt < 1:10138328‑M1/15‑1 (MQ=255) gAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatt < 1:6407463‑M1/51‑16 (MQ=255) tttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagt > 1:1688909‑M1/32‑51 (MQ=255) aaGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatttt < 1:10242397‑M1/51‑18 (MQ=255) aGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttg < 1:9178366‑M1/51‑19 (MQ=255) taactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaa < 1:3112996‑M1/22‑1 (MQ=255) actgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaag > 1:5634639‑M1/28‑51 (MQ=255) actgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaag < 1:6004020‑M1/24‑1 (MQ=255) ctgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagt < 1:6088762‑M1/25‑1 (MQ=255) tgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagta > 1:9077260‑M1/26‑51 (MQ=255) tgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagta < 1:3331165‑M1/26‑1 (MQ=255) ccccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttgga < 1:5105650‑M1/51‑24 (MQ=255) gtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagtaa > 1:8875249‑M1/25‑51 (MQ=255) tccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAgtaaagtana > 1:1367463‑M1/24‑51 (MQ=255) tccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAgtaaagtaaa > 1:96578‑M1/24‑51 (MQ=255) ccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAAc > 1:7099073‑M1/23‑51 (MQ=255) ccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAAc < 1:8021763‑M1/29‑1 (MQ=255) caactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAAcc > 1:7917284‑M1/22‑51 (MQ=255) aGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgat > 1:2418796‑M1/1‑24 (MQ=255) aGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgat > 1:5012822‑M1/1‑24 (MQ=255) aGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgat > 1:8418677‑M1/1‑24 (MQ=255) gTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatg > 1:4509591‑M1/1‑23 (MQ=255) tCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatga > 1:2022031‑M1/1‑22 (MQ=255) actttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCt > 1:10535803‑M1/20‑51 (MQ=255) ctttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCtt < 1:3763633‑M1/33‑1 (MQ=255) cGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaa > 1:7493886‑M1/1‑21 (MQ=255) cGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaa < 1:5853860‑M1/51‑31 (MQ=255) cGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaa < 1:4737862‑M1/51‑31 (MQ=255) tttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTc > 1:877240‑M1/18‑51 (MQ=255) tttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTc > 1:8287848‑M1/18‑51 (MQ=255) ttttggggtcagtacaATTTGGGGCCGCCGtt > 1:5869139‑M1/17‑32 (MQ=255) ttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt > 1:9302650‑M1/17‑51 (MQ=255) ttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt < 1:8403928‑M1/35‑1 (MQ=255) aGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaat < 1:2641311‑M1/51‑33 (MQ=255) aGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaat < 1:10721768‑M1/51‑33 (MQ=255) tttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg < 1:1462788‑M1/36‑1 (MQ=255) tttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg > 1:3446087‑M1/16‑51 (MQ=255) tttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg > 1:9804952‑M1/16‑51 (MQ=255) tggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGc > 1:4022502‑M1/14‑51 (MQ=255) aaTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgga < 1:8657016‑M1/51‑36 (MQ=255) aTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaa < 1:7808533‑M1/51‑37 (MQ=255) tGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaat < 1:5962638‑M1/51‑38 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:3048984‑M1/11‑51 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:6728428‑M1/11‑51 (MQ=255) gtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTa > 1:3972841‑M1/10‑51 (MQ=255) ctctTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatag < 1:212146‑M1/51‑40 (MQ=255) tcttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:4272259‑M1/1‑11 (MQ=255) tcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTAt < 1:8378664‑M1/43‑1 (MQ=255) cttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcc < 1:9575650‑M1/51‑42 (MQ=255) ttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagccc < 1:357808‑M1/51‑43 (MQ=255) gtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCaa < 1:7357318‑M1/46‑1 (MQ=255) tacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCtt > 1:10758032‑M1/5‑37 (MQ=255) tGTATTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:1153096‑M1/51‑46 (MQ=255) acaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACt > 1:6351062‑M1/4‑51 (MQ=255) gTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:1268023‑M1/1‑5 (MQ=255) gTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:7006561‑M1/51‑47 (MQ=255) caATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTg > 1:5712592‑M1/3‑51 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:6179697‑M1/1‑4 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:2983027‑M1/51‑48 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:6678540‑M1/51‑48 (MQ=255) aATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGc > 1:9367377‑M1/2‑51 (MQ=255) aTTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCa < 1:1503295/51‑1 (MQ=255) aTTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCa < 1:4114539/51‑1 (MQ=255) tttgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:10047047‑M1/1‑2 (MQ=255) tttgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:5337253‑M1/51‑50 (MQ=255) tttgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:5820744‑M1/51‑50 (MQ=255) tttgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:4590906‑M1/1‑2 (MQ=255) tttgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:8693760‑M1/1‑2 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg > 1:885207‑M1/1‑1 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg > 1:442819‑M1/1‑1 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg < 1:3463531‑M1/51‑51 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg < 1:9138727‑M1/51‑51 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg > 1:8572803‑M1/1‑1 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg > 1:1913215‑M1/1‑1 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg < 1:8518984‑M1/51‑51 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg > 1:5138408‑M1/1‑1 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg < 1:5226642‑M1/51‑51 (MQ=255) ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg > 1:9751425‑M1/1‑1 (MQ=255) ttGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCAtt > 1:10000676/1‑51 (MQ=255) | ATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATT > REL606/3841144‑3841244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |