| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,841,192 | IS150 (+) +3 bp | 100% | coding (389‑391/1074 nt) | recF ← | recombination protein F |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3841192 = | 0 (0.000) | 115 (1.210) | 58/80 | NT | 100% | coding (391/1074 nt) | recF | recombination protein F |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3841194 | 0 (0.000) | 119 (1.320) | 60/76 | NT | 100% | coding (389/1074 nt) | recF | recombination protein F |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 299 total aligned reads displayed.
AAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCA > REL606/3841142‑3841242 | aaaTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTa > 1:1171840/1‑51 (MQ=255) aTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAtt > 1:8226966/1‑51 (MQ=255) tCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTt < 1:3207444‑M1/51‑2 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTg < 1:653727‑M1/5‑1 (MQ=255) ccGGGTTCGTTGTGAAAGAATCCCCAGTCGAGGAATGCTCTTCTGTATTtg > 1:5552528‑M1/1‑49 (MQ=255) cGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgt > 1:1494485‑M1/1‑48 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTggg < 1:8418606‑M1/7‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTggg < 1:10074134‑M1/7‑1 (MQ=255) gggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgta < 1:7515293‑M1/51‑5 (MQ=255) gggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgta < 1:4106212‑M1/51‑5 (MQ=255) ggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtac > 1:8118933‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTgggg < 1:483418‑M1/8‑1 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgc > 1:431224‑M1/43‑51 (MQ=255) ttCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactg < 1:2961697‑M1/51‑8 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgcc < 1:3934899‑M1/10‑1 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgcc < 1:2104370‑M1/10‑1 (MQ=255) tCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgc < 1:10420634‑M1/51‑9 (MQ=255) cGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgca > 1:2564701‑M1/1‑42 (MQ=255) gTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcac < 1:5742500‑M1/51‑11 (MQ=255) tgtgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcaccc < 1:1244836‑M1/51‑13 (MQ=255) tgtgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcaccc < 1:5825012‑M1/51‑13 (MQ=255) tgtgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcaccc > 1:10307554‑M1/1‑39 (MQ=255) tgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccat > 1:8177911‑M1/1‑37 (MQ=255) tgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccat < 1:6366218‑M1/51‑15 (MQ=255) tgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGa > 1:1442871‑M1/34‑51 (MQ=255) tgtttaactgtccaactttttgggggcagtacaATTTGGGGCCGCCGTTGa < 1:6060815‑M1/18‑1 (MQ=255) gtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGag < 1:10011382‑M1/19‑1 (MQ=255) gtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGag < 1:9141792‑M1/19‑1 (MQ=255) tttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagt > 1:2283127‑M1/32‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagt < 1:5150815‑M1/20‑1 (MQ=255) aaGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatttt < 1:3435817‑M1/51‑18 (MQ=255) aaGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatttt < 1:10242397‑M1/51‑18 (MQ=255) ttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagta < 1:7051194‑M1/21‑1 (MQ=255) aGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttg < 1:9178366‑M1/51‑19 (MQ=255) taactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaa < 1:3112996‑M1/22‑1 (MQ=255) taactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaa > 1:8593274‑M1/30‑51 (MQ=255) aactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaa > 1:9558649‑M1/29‑51 (MQ=255) actgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaag > 1:5634639‑M1/28‑51 (MQ=255) tCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttgg < 1:6602759‑M1/51‑23 (MQ=255) tgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagta < 1:3331165‑M1/26‑1 (MQ=255) tgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagta > 1:9077260‑M1/26‑51 (MQ=255) ccccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttgga < 1:5105650‑M1/51‑24 (MQ=255) cccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggac < 1:718963‑M1/51‑25 (MQ=255) cccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggac < 1:7842275‑M1/51‑25 (MQ=255) tccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAgtaaagtaaa > 1:96578‑M1/24‑51 (MQ=255) ccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacg < 1:8513160‑M1/51‑26 (MQ=255) tCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatga < 1:7772601‑M1/51‑30 (MQ=255) cGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaa < 1:10616739‑M1/51‑31 (MQ=255) cGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaa < 1:5853860‑M1/51‑31 (MQ=255) tttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTc < 1:6921331‑M1/34‑1 (MQ=255) tttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTc > 1:877240‑M1/18‑51 (MQ=255) ttttggggtcagtacaATTTGGGGCCGCCGtt > 1:5869139‑M1/17‑32 (MQ=255) ttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt > 1:9302650‑M1/17‑51 (MQ=255) ttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt < 1:4555206‑M1/35‑1 (MQ=255) ttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt < 1:10762264‑M1/35‑1 (MQ=255) tttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg > 1:9804952‑M1/16‑51 (MQ=255) tttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg < 1:1531593‑M1/36‑1 (MQ=255) tttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg < 1:10148759‑M1/36‑1 (MQ=255) ttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTgg > 1:6415625‑M1/15‑51 (MQ=255) gAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgg < 1:9669361‑M1/51‑35 (MQ=255) gAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgg < 1:3461838‑M1/51‑35 (MQ=255) gAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgg < 1:6740511‑M1/51‑35 (MQ=255) gAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgg > 1:504262‑M1/1‑17 (MQ=255) gAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgg < 1:8662065‑M1/51‑35 (MQ=255) tggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGc > 1:8039516‑M1/14‑51 (MQ=255) tggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGc < 1:2366637‑M1/38‑1 (MQ=255) aaTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgga > 1:8393194‑M1/1‑16 (MQ=255) aaTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgga > 1:6258954‑M1/1‑16 (MQ=255) ggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTGAACCCTTCTGGCg > 1:6864125‑M1/13‑51 (MQ=255) ggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCg < 1:3574343‑M1/39‑1 (MQ=255) aTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaa < 1:6350491‑M1/51‑37 (MQ=255) aTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaa < 1:1993501‑M1/51‑37 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:8896681‑M1/11‑51 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:3048984‑M1/11‑51 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:5290042‑M1/11‑51 (MQ=255) ctctTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatag > 1:4721824‑M1/1‑12 (MQ=255) tcttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:4272259‑M1/1‑11 (MQ=255) tcttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:7923604‑M1/1‑11 (MQ=255) tcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTAt < 1:540794‑M1/43‑1 (MQ=255) ttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagccc < 1:4005292‑M1/51‑43 (MQ=255) agtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCa < 1:3783456‑M1/45‑1 (MQ=255) tctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccc < 1:669691‑M1/51‑44 (MQ=255) gtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCaa < 1:7357318‑M1/46‑1 (MQ=255) gtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCaa < 1:7079420‑M1/46‑1 (MQ=255) ctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:3668530‑M1/51‑45 (MQ=255) tGTATTtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:4477778‑M1/1‑6 (MQ=255) gTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:8351275‑M1/51‑47 (MQ=255) gTATTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:5960635‑M1/50‑46 (MQ=255) caATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTg > 1:5712592‑M1/3‑51 (MQ=255) caATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTg > 1:1774630‑M1/3‑51 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:1364150‑M1/1‑4 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:2971030‑M1/51‑48 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:6113511‑M1/51‑48 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:4759440‑M1/1‑4 (MQ=255) aATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGc < 1:6003352‑M1/50‑1 (MQ=255) aATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGc > 1:9367377‑M1/2‑51 (MQ=255) aTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:10734647‑M1/51‑49 (MQ=255) aTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:6012797‑M1/51‑49 (MQ=255) aTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:8824247‑M1/51‑49 (MQ=255) aTTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCa < 1:4114539/51‑1 (MQ=255) | AAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCA > REL606/3841142‑3841242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |