| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,462,266 | IS150 (+) +3 bp | 100% | intergenic (‑28/‑311) | mokB ← / → trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 82 (0.860) | 47/80 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1462266 = | 0 (0.000) | intergenic (‑28/‑313) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor | |||||
| * | ? | REL606 | = 1462268 | 0 (0.000) | 118 (1.240) | 60/80 | NT | 100% | intergenic (‑30/‑311) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 261 total aligned reads displayed.
GATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTC > REL606/1462218‑1462318 | gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGt > 1:7572569‑M2/49‑51 (MQ=255) aTCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTt < 1:4933527‑M1/51‑2 (MQ=255) cTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgt < 1:10422630‑M1/51‑4 (MQ=255) cTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgt < 1:6135321‑M1/51‑4 (MQ=255) tGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgta > 1:9467334‑M1/1‑47 (MQ=255) gAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtac > 1:3978805‑M1/1‑46 (MQ=255) gAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtac > 1:2530019‑M1/1‑46 (MQ=255) gAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtac > 1:1158710‑M1/1‑46 (MQ=255) aaTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtact > 1:10289670‑M1/1‑45 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg > 1:5408381‑M1/1‑44 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg < 1:8082443‑M1/51‑8 (MQ=255) tGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgca > 1:2119349‑M1/1‑42 (MQ=255) tGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgca > 1:4610541‑M1/1‑42 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGt < 1:5642050‑M2/15‑1 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc > 1:7153157‑M1/1‑39 (MQ=255) tAGGNTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc > 1:4051617‑M1/1‑39 (MQ=255) aGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccca < 1:5688970‑M1/51‑14 (MQ=255) aGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccca > 1:7535311‑M1/1‑38 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCt > 1:4399579‑M2/35‑51 (MQ=255) ggTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccat > 1:4776463‑M1/1‑37 (MQ=255) ggTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccat < 1:4869937‑M1/51‑15 (MQ=255) ggTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccat > 1:5457457‑M1/1‑37 (MQ=255) tgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCtt < 1:7951766‑M2/18‑1 (MQ=255) ttCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattt > 1:4211690‑M1/1‑35 (MQ=255) gtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCttt > 1:1274714‑M2/33‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCttt > 1:1703011‑M2/33‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCttt > 1:292382‑M2/32‑50 (MQ=255) tttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTc > 1:9819777‑M2/32‑51 (MQ=255) tCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatttt < 1:9507643‑M1/51‑18 (MQ=255) ttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCt < 1:9032238‑M2/21‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCt > 1:8479464‑M2/31‑51 (MQ=255) cATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttg > 1:7363169‑M1/1‑33 (MQ=255) taactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTg < 1:10651746‑M2/22‑1 (MQ=255) ttCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgtt > 1:10782240‑M1/1‑31 (MQ=255) ttCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgtt < 1:1918390‑M1/51‑21 (MQ=255) ttCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgtt < 1:8602670‑M1/51‑21 (MQ=255) aactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGa > 1:9641292‑M2/29‑51 (MQ=255) aactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGa < 1:529589‑M2/23‑1 (MQ=255) aactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGa < 1:3701583‑M2/23‑1 (MQ=255) tCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttg > 1:6927498‑M1/1‑30 (MQ=255) actgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAt < 1:4748346‑M2/24‑1 (MQ=255) actgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAt < 1:9617678‑M2/24‑1 (MQ=255) cGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttgg > 1:6465231‑M1/1‑29 (MQ=255) cGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttgg > 1:3519704‑M1/1‑29 (MQ=255) gTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttgga > 1:8565662‑M1/1‑28 (MQ=255) ttGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggac < 1:3143723‑M1/51‑25 (MQ=255) gtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAtt > 1:4689605‑M2/25‑49 (MQ=255) ccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCg > 1:5162995‑M2/23‑51 (MQ=255) ccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCg > 1:7671787‑M2/23‑51 (MQ=255) ccTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatg < 1:9728500‑M1/51‑29 (MQ=255) aactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGt < 1:10601313‑M2/31‑1 (MQ=255) aactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGt < 1:5565317‑M2/31‑1 (MQ=255) cTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatga < 1:5062794‑M1/51‑30 (MQ=255) cTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatga < 1:3762054‑M1/51‑30 (MQ=255) actttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGtt > 1:5928293‑M2/20‑51 (MQ=255) ctttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTa < 1:1896365‑M2/33‑1 (MQ=255) tttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCg > 1:3877046‑M2/18‑46 (MQ=255) tttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAg > 1:3182486‑M2/18‑51 (MQ=255) cGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaa < 1:7836917‑M1/51‑32 (MQ=255) ttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGc > 1:10232529‑M2/17‑51 (MQ=255) tttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGcc > 1:3605356‑M2/16‑51 (MQ=255) ttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCt < 1:5328095‑M2/37‑1 (MQ=255) ttGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgg < 1:3342013‑M1/51‑35 (MQ=255) ttGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgg > 1:1754488‑M1/1‑17 (MQ=255) tnggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCt > 1:9562283‑M2/15‑51 (MQ=255) tGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgga > 1:5193167‑M1/1‑16 (MQ=255) gATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaa > 1:9793288‑M1/1‑15 (MQ=255) gggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCTGGTTAGCCTGaa < 1:2077342‑M2/40‑1 (MQ=255) gggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGaa < 1:6769974‑M2/40‑1 (MQ=255) aTAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaat < 1:7745095‑M1/51‑38 (MQ=255) tAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaata < 1:6594263‑M1/51‑39 (MQ=255) tAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaata < 1:10477802‑M1/51‑39 (MQ=255) ggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGaaa < 1:8530809‑M2/41‑1 (MQ=255) gtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGaaaa < 1:1404886‑M2/42‑1 (MQ=255) gtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGaaaa < 1:7866876‑M2/42‑1 (MQ=255) aGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatag > 1:10004617‑M1/1‑12 (MQ=255) aGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatag > 1:267991‑M1/1‑12 (MQ=255) aGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatag > 1:2359060‑M1/1‑12 (MQ=255) aaaTATCGGTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:7508045‑M1/1‑10 (MQ=255) aaTATCGGTtgtactgcacccattttgttggacgatgaaatggaatagccc < 1:8139285‑M1/51‑43 (MQ=255) aaTATCGGTtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:1791887‑M1/1‑9 (MQ=255) gtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGa > 1:3283918‑M2/6‑51 (MQ=255) tacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaa < 1:6673783‑M2/47‑1 (MQ=255) acaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaaa > 1:9320902‑M2/4‑51 (MQ=255) acaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaaa < 1:6286899‑M2/48‑1 (MQ=255) acaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaaa < 1:8394964‑M2/48‑1 (MQ=255) tCGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:4080531‑M1/1‑5 (MQ=255) cGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:4267175‑M1/51‑48 (MQ=255) cGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:10039999‑M1/1‑4 (MQ=255) aGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGt > 1:5946809‑M2/2‑51 (MQ=255) aGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGt > 1:9004816‑M2/2‑51 (MQ=255) ggTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:9178240‑M1/51‑49 (MQ=255) ggTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:9148404‑M1/1‑3 (MQ=255) ggTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:6545436‑M1/51‑49 (MQ=255) ggTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:88849‑M1/1‑3 (MQ=255) gtcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGtct < 1:8711297/51‑1 (MQ=255) gTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:4576726‑M1/1‑2 (MQ=255) gTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:5544816‑M1/51‑50 (MQ=255) gTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:8023259‑M1/51‑50 (MQ=255) tcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGtctc > 1:8803307/1‑51 (MQ=255) | GATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTC > REL606/1462218‑1462318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |