Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 1,462,266 IS150 (+) +3 bp 100% intergenic (‑28/‑311) mokB ← / → trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 666130NA (NA)82 (0.860) 47/80 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 1462266 = 0 (0.000)intergenic (‑28/‑313) mokB/trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor
* ? REL606 = 14622680 (0.000)118 (1.240) 60/80 NT 100% intergenic (‑30/‑311) mokB/trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region

Only 100 of 151 total aligned reads displayed.

ATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/1462219‑1462268
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  <  REL606/2775877‑2775829
                                                                                                   
 TCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTG                                                 >  1:682524/1‑51
  CTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGT                                                <  1:6135321/51‑1
  CTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGT                                                <  1:10422630/51‑1
   TGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTA                                               >  1:9467334/1‑51
    GAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTAC                                              >  1:2530019/1‑51
     AATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACT                                             >  1:10289670/1‑51
      ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG                                            <  1:4893961/51‑1
      ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG                                            <  1:3542050/51‑1
      ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG                                            >  1:5408381/1‑51
      ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG                                            >  1:6635807/1‑51
      ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG                                            <  1:9458695/51‑1
        TGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCA                                          >  1:4610541/1‑51
         GCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCAC                                         <  1:10452598/51‑1
         GCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCAC                                         <  1:329798/51‑1
         GCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCAC                                         <  1:6714284/51‑1
          CTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACC                                        >  1:7508801/1‑51
           TAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCC                                       >  1:1506925/1‑51
           TAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCC                                       <  1:3988337/51‑1
           TAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCC                                       <  1:5621187/51‑1
           TAGGNTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCC                                       >  1:4051617/1‑51
            AGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCA                                      >  1:7535311/1‑51
             GGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCAT                                     <  1:7655830/51‑1
             GGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCAT                                     <  1:4869937/51‑1
             GGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCAT                                     >  1:4776463/1‑51
              GTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATT                                    <  1:5392837/51‑1
               TTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTT                                   >  1:4211690/1‑51
               TTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTT                                   <  1:4721344/51‑1
                TCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTT                                  >  1:6154789/1‑51
                TCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTT                                  <  1:9155029/51‑1
                TCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTT                                  >  1:3569578/1‑51
                TCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTT                                  >  1:5477786/1‑51
                 CATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTG                                 >  1:7363169/1‑51
                 CATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTG                                 <  1:2034107/51‑1
                  ATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGT                                <  1:8517055/51‑1
                   TTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTT                               <  1:8602670/51‑1
                   TTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTT                               >  1:10782240/1‑51
                   TTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTT                               <  1:8131136/51‑1
                   TTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTT                               <  1:9081201/51‑1
                    TCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTG                              >  1:6927498/1‑51
                    TCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTG                              <  1:1715391/51‑1
                     CGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGG                             >  1:6465231/1‑51
                      GTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGA                            >  1:1258618/1‑51
                      GTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGA                            >  1:8565662/1‑51
                      GTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGA                            >  1:10008326/1‑51
                       TTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGAC                           <  1:3143723/51‑1
                       TTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGAC                           <  1:6481312/51‑1
                         GGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGA                         <  1:5695373/51‑1
                         GGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGA                         >  1:1911874/1‑51
                          GCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGAT                        >  1:8859756/1‑51
                          GCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGAT                        <  1:4984494/51‑1
                          GCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGAT                        <  1:9719958/51‑1
                            CTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGA                      >  1:9812410/1‑51
                            CTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGA                      <  1:3762054/51‑1
                            CTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGA                      >  1:5457133/1‑51
                             TCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAA                     >  1:1787305/1‑51
                             TCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAA                     >  1:10057081/1‑51
                             TCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAA                     >  1:183208/1‑51
                              CGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAA                    <  1:7836917/51‑1
                                GTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATG                  <  1:5045987/51‑1
                                 TTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGG                 >  1:1754488/1‑51
                                 TTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGG                 <  1:3342013/51‑1
                                  TGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA                >  1:8703154/1‑51
                                  TGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA                >  1:5193167/1‑51
                                   GATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA               >  1:9793288/1‑51
                                   GATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA               >  1:2000047/1‑51
                                    ATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT              <  1:7745095/51‑1
                                     TAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA             <  1:6594263/51‑1
                                     TAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA             >  1:8550889/1‑51
                                     TAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA             <  1:10477802/51‑1
                                      AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG            >  1:10004617/1‑51
                                      AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG            >  1:267991/1‑51
                                      AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG            >  1:2359060/1‑51
                                      AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG            >  1:5317825/1‑51
                                      AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG            <  1:7347718/51‑1
                                       GAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC           <  1:3168490/51‑1
                                       GAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC           >  1:3757549/1‑51
                                       GAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC           >  1:10375009/1‑51
                                        AAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC          >  1:7508045/1‑51
                                        AAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC          >  1:4315213/1‑51
                                        AAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC          >  1:654939/1‑51
                                         AATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC         >  1:1791887/1‑51
                                          ATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC        >  1:8023309/1‑51
                                           TATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT       >  1:7553776/1‑51
                                            ATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA      <  1:979297/51‑1
                                             TCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA     <  1:7895149/51‑1
                                             TCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA     >  1:4080531/1‑51
                                             TCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA     <  1:5766118/51‑1
                                             TCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA     >  1:9637124/1‑51
                                              CGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT    <  1:10787070/51‑1
                                              CGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT    <  1:4267175/51‑1
                                               GGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA   >  1:88849/1‑51
                                               GGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA   >  1:2307253/1‑51
                                               GGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA   <  1:9178240/51‑1
                                                GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  <  1:8120214/51‑1
                                                GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  <  1:9092841/51‑1
                                                GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  <  1:8472461/51‑1
                                                GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  >  1:4576726/1‑51
                                                GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  <  1:8023259/51‑1
                                                GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  <  1:5660339/51‑1
                                                GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  <  1:5544816/51‑1
                                                                                                   
ATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/1462219‑1462268
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  <  REL606/2775877‑2775829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.