Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,462,266 | IS150 (+) +3 bp | 100% | intergenic (‑28/‑311) | mokB ← / → trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 666130 | NA (NA) | 82 (0.860) | 47/80 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | 1462266 = | 0 (0.000) | intergenic (‑28/‑313) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor | |||||
* | ? | REL606 | = 1462268 | 0 (0.000) | 118 (1.240) | 60/80 | NT | 100% | intergenic (‑30/‑311) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
Only 100 of 151 total aligned reads displayed.
ATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1462219‑1462268 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < REL606/2775877‑2775829 TCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTG > 1:682524/1‑51 CTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGT < 1:6135321/51‑1 CTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGT < 1:10422630/51‑1 TGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTA > 1:9467334/1‑51 GAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTAC > 1:2530019/1‑51 AATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACT > 1:10289670/1‑51 ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG < 1:4893961/51‑1 ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG < 1:3542050/51‑1 ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG > 1:5408381/1‑51 ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG > 1:6635807/1‑51 ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTG < 1:9458695/51‑1 TGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCA > 1:4610541/1‑51 GCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCAC < 1:10452598/51‑1 GCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCAC < 1:329798/51‑1 GCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCAC < 1:6714284/51‑1 CTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACC > 1:7508801/1‑51 TAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCC > 1:1506925/1‑51 TAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCC < 1:3988337/51‑1 TAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCC < 1:5621187/51‑1 TAGGNTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCC > 1:4051617/1‑51 AGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCA > 1:7535311/1‑51 GGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCAT < 1:7655830/51‑1 GGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCAT < 1:4869937/51‑1 GGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCAT > 1:4776463/1‑51 GTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATT < 1:5392837/51‑1 TTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTT > 1:4211690/1‑51 TTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTT < 1:4721344/51‑1 TCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTT > 1:6154789/1‑51 TCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTT < 1:9155029/51‑1 TCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTT > 1:3569578/1‑51 TCATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTT > 1:5477786/1‑51 CATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTG > 1:7363169/1‑51 CATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTG < 1:2034107/51‑1 ATTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGT < 1:8517055/51‑1 TTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTT < 1:8602670/51‑1 TTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTT > 1:10782240/1‑51 TTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTT < 1:8131136/51‑1 TTCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTT < 1:9081201/51‑1 TCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTG > 1:6927498/1‑51 TCGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTG < 1:1715391/51‑1 CGTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGG > 1:6465231/1‑51 GTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGA > 1:1258618/1‑51 GTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGA > 1:8565662/1‑51 GTTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGA > 1:10008326/1‑51 TTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGAC < 1:3143723/51‑1 TTGGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGAC < 1:6481312/51‑1 GGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGA < 1:5695373/51‑1 GGCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGA > 1:1911874/1‑51 GCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGAT > 1:8859756/1‑51 GCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGAT < 1:4984494/51‑1 GCCTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGAT < 1:9719958/51‑1 CTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGA > 1:9812410/1‑51 CTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGA < 1:3762054/51‑1 CTCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGA > 1:5457133/1‑51 TCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:1787305/1‑51 TCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:10057081/1‑51 TCGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:183208/1‑51 CGGTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAA < 1:7836917/51‑1 GTTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:5045987/51‑1 TTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:1754488/1‑51 TTGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:3342013/51‑1 TGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:8703154/1‑51 TGATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:5193167/1‑51 GATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 1:9793288/1‑51 GATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 1:2000047/1‑51 ATAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:7745095/51‑1 TAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:6594263/51‑1 TAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA > 1:8550889/1‑51 TAGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:10477802/51‑1 AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:10004617/1‑51 AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:267991/1‑51 AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:2359060/1‑51 AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:5317825/1‑51 AGAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 1:7347718/51‑1 GAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC < 1:3168490/51‑1 GAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:3757549/1‑51 GAAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:10375009/1‑51 AAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:7508045/1‑51 AAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:4315213/1‑51 AAATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:654939/1‑51 AATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:1791887/1‑51 ATATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC > 1:8023309/1‑51 TATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > 1:7553776/1‑51 ATCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:979297/51‑1 TCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA < 1:7895149/51‑1 TCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 1:4080531/1‑51 TCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA < 1:5766118/51‑1 TCGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 1:9637124/1‑51 CGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 1:10787070/51‑1 CGGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 1:4267175/51‑1 GGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:88849/1‑51 GGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:2307253/1‑51 GGTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:9178240/51‑1 GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 1:8120214/51‑1 GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 1:9092841/51‑1 GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 1:8472461/51‑1 GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > 1:4576726/1‑51 GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 1:8023259/51‑1 GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 1:5660339/51‑1 GTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 1:5544816/51‑1 ATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1462219‑1462268 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < REL606/2775877‑2775829 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |