| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,462,266 | IS150 (+) +3 bp | 100% | intergenic (‑28/‑311) | mokB ← / → trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 82 (0.860) | 47/80 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1462266 = | 0 (0.000) | intergenic (‑28/‑313) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor | |||||
| * | ? | REL606 | = 1462268 | 0 (0.000) | 118 (1.240) | 60/80 | NT | 100% | intergenic (‑30/‑311) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 255 total aligned reads displayed.
AAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTC > REL606/1462216‑1462316 | aaGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATAtcg > 1:9763851/1‑51 (MQ=255) aGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATAtcgg > 1:4795152/1‑51 (MQ=255) aGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATAtcgg > 1:6909861/1‑51 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGt < 1:5556312‑M2/3‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGt < 1:7865223‑M2/3‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGt < 1:9584556‑M2/3‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGTc < 1:9690393‑M2/4‑1 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGTCgg > 1:5673219‑M2/46‑51 (MQ=255) cTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgt < 1:6135321‑M1/51‑4 (MQ=255) cTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgt < 1:10422630‑M1/51‑4 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGTCggg < 1:2463598‑M2/7‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGTCggg > 1:9561792‑M2/45‑51 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaGGTCg > 1:7979982‑M2/44‑48 (MQ=255) aaTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtact > 1:10289670‑M1/1‑45 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg < 1:4893961‑M1/51‑8 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg > 1:8894922‑M1/1‑44 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg > 1:5408381‑M1/1‑44 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg < 1:9458695‑M1/51‑8 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg < 1:8082443‑M1/51‑8 (MQ=255) gCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcac < 1:10452598‑M1/51‑11 (MQ=255) gCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcac < 1:5941118‑M1/51‑11 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTc < 1:5172506‑M2/13‑1 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCg > 1:2757706‑M2/38‑51 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCg > 1:109028‑M2/38‑51 (MQ=255) cTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacc > 1:7508801‑M1/1‑40 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc < 1:3988337‑M1/51‑13 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc < 1:5621187‑M1/51‑13 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc < 1:4058220‑M1/51‑13 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTc > 1:8840031‑M2/36‑51 (MQ=255) aGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccca < 1:671643‑M1/51‑14 (MQ=255) ggTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccat < 1:7655830‑M1/51‑15 (MQ=255) ggTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccat > 1:5457457‑M1/1‑37 (MQ=255) ggTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccat > 1:4776463‑M1/1‑37 (MQ=255) tgtttaactgtccaactttttggggtcagtacaGGTCgg > 1:3943575‑M2/34‑39 (MQ=255) tttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCttt > 1:292382‑M2/32‑50 (MQ=255) tttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTc > 1:9819777‑M2/32‑51 (MQ=255) tCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatttt > 1:6296664‑M1/1‑34 (MQ=255) tCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatttt > 1:3569578‑M1/1‑34 (MQ=255) tCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatttt < 1:9155029‑M1/51‑18 (MQ=255) ttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCt > 1:8479464‑M2/31‑51 (MQ=255) ttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCt > 1:5083832‑M2/31‑51 (MQ=255) ttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCt > 1:520278‑M2/31‑51 (MQ=255) cATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttg < 1:5340‑M1/51‑19 (MQ=255) cATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttg < 1:2034107‑M1/51‑19 (MQ=255) aTTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgt < 1:8517055‑M1/51‑20 (MQ=255) ttCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgtt > 1:10782240‑M1/1‑31 (MQ=255) ttCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgtt < 1:9081201‑M1/51‑21 (MQ=255) aactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGa < 1:529589‑M2/23‑1 (MQ=255) aactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGa < 1:3701583‑M2/23‑1 (MQ=255) actgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAt < 1:4748346‑M2/24‑1 (MQ=255) actgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAt < 1:4280930‑M2/24‑1 (MQ=255) cGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttgg > 1:3519704‑M1/1‑29 (MQ=255) cGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttgg > 1:6465231‑M1/1‑29 (MQ=255) gTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttgga > 1:1258618‑M1/1‑28 (MQ=255) ttGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggac < 1:3143723‑M1/51‑25 (MQ=255) ttGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggac < 1:4240114‑M1/51‑25 (MQ=255) gtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAtt > 1:4689605‑M2/25‑49 (MQ=255) ggCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacga > 1:1911874‑M1/1‑25 (MQ=255) gCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgat > 1:4645544‑M1/1‑24 (MQ=255) ccTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatg < 1:1559972‑M1/51‑29 (MQ=255) aactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGt < 1:10601313‑M2/31‑1 (MQ=255) cTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatga < 1:3762054‑M1/51‑30 (MQ=255) cTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatga > 1:8581858‑M1/1‑22 (MQ=255) tCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaa > 1:183208‑M1/1‑21 (MQ=255) tCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaa > 1:1787305‑M1/1‑21 (MQ=255) ctttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGtt > 1:8160116‑M2/19‑50 (MQ=255) tttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCg > 1:3877046‑M2/18‑46 (MQ=255) tttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAg > 1:3182486‑M2/18‑51 (MQ=255) ttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGc > 1:7828913‑M2/17‑51 (MQ=255) ttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGc > 1:10232529‑M2/17‑51 (MQ=255) tttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGcc > 1:2612486‑M2/16‑51 (MQ=255) tttggggtcagtacaGGTCGGGGCCTTCGCCTTTCTGATTCCCGGTTAGcc > 1:10632540‑M2/16‑51 (MQ=255) gTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatg < 1:5045987‑M1/51‑34 (MQ=255) ttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCt < 1:7495865‑M2/37‑1 (MQ=255) ttGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgg > 1:9299625‑M1/1‑17 (MQ=255) ttGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgg > 1:1754488‑M1/1‑17 (MQ=255) ttGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgg < 1:3342013‑M1/51‑35 (MQ=255) tggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTg < 1:4110838‑M2/38‑1 (MQ=255) tGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgga > 1:8703154‑M1/1‑16 (MQ=255) gATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaa > 1:9793288‑M1/1‑15 (MQ=255) aTAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaat < 1:7745095‑M1/51‑38 (MQ=255) tAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaata < 1:6594263‑M1/51‑39 (MQ=255) tAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaata > 1:8550889‑M1/1‑13 (MQ=255) ggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGaaa < 1:9493152‑M2/41‑1 (MQ=255) gtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGaaaa < 1:1404886‑M2/42‑1 (MQ=255) aGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatag > 1:10004617‑M1/1‑12 (MQ=255) aGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatag < 1:7347718‑M1/51‑40 (MQ=255) cagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACa > 1:4419095‑M2/8‑51 (MQ=255) gtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGa > 1:3283918‑M2/6‑51 (MQ=255) gtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGa < 1:2099470‑M2/46‑1 (MQ=255) tatCGGTtgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:7553776‑M1/1‑7 (MQ=255) tacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaa < 1:6673783‑M2/47‑1 (MQ=255) acaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaaa < 1:6967420‑M2/48‑1 (MQ=255) tCGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:7895149‑M1/51‑47 (MQ=255) tCGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:9637124‑M1/1‑5 (MQ=255) tCGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:5766118‑M1/51‑47 (MQ=255) cGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:10039999‑M1/1‑4 (MQ=255) aGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGt > 1:9004816‑M2/2‑51 (MQ=255) ggTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:6545436‑M1/51‑49 (MQ=255) ggTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:2307253‑M1/1‑3 (MQ=255) | AAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTC > REL606/1462216‑1462316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |