| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,841,192 | IS150 (+) +3 bp | coding (389‑391/1074 nt) | recF ← | recombination protein F |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3841192 = | 0 (0.000) | 81 (1.020) | 60/100 | 0.1 | 100% | coding (391/1074 nt) | recF | recombination protein F |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3841194 | 0 (0.000) | 128 (1.680) | 64/96 | 0.0 | 100% | coding (389/1074 nt) | recF | recombination protein F |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 197 total aligned reads displayed.
AAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCA > REL606/3841142‑3841242 | aaaTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTa > 1:1171840/1‑51 (MQ=255) aTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAtt < 1:4129785/51‑1 (MQ=255) aTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAtt < 1:5428461/51‑1 (MQ=255) tCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTt < 1:3207444‑M1/51‑2 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAttt > 1:1882216‑M1/48‑51 (MQ=255) ccGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtg < 1:4745924‑M1/51‑3 (MQ=255) ccGGGTTCGTTGTGAAAGAATCCCCAGTCGAGGAATGCTCTTCTGTATTtg > 1:5552528‑M1/1‑49 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTgg < 1:1669236‑M1/6‑1 (MQ=255) cGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgt > 1:4016059‑M1/1‑48 (MQ=255) cGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgt > 1:1494485‑M1/1‑48 (MQ=255) gggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgta < 1:4106212‑M1/51‑5 (MQ=255) ggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtac > 1:1399709‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTgggg < 1:4111980‑M1/8‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTgggg < 1:483418‑M1/8‑1 (MQ=255) ttCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactg < 1:2961697‑M1/51‑8 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgcc < 1:2104370‑M1/10‑1 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgcc < 1:3934899‑M1/10‑1 (MQ=255) tCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgc > 1:6533572‑M1/1‑43 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgccgc < 1:6846775‑M1/12‑1 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGgccgcc > 1:4528969‑M1/39‑51 (MQ=255) ttGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacc > 1:5985076‑M1/1‑40 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGccgccg < 1:2289478‑M1/14‑1 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGccgccg > 1:584237‑M1/38‑51 (MQ=255) tgtgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcaccc > 1:5739152‑M1/1‑39 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGtt < 1:352252‑M1/16‑1 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTg < 1:5221914‑M1/17‑1 (MQ=255) gAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatt < 1:1004535‑M1/51‑16 (MQ=255) gtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGag < 1:5803666‑M1/19‑1 (MQ=255) tttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagt > 1:296840‑M1/32‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagt < 1:3450347‑M1/20‑1 (MQ=255) aaGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatttt < 1:3435817‑M1/51‑18 (MQ=255) aaGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatttt < 1:57726‑M1/51‑18 (MQ=255) actgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaag < 1:6004020‑M1/24‑1 (MQ=255) tCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttgg > 1:1073925‑M1/1‑29 (MQ=255) tCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttgg < 1:6602759‑M1/51‑23 (MQ=255) ctgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagt < 1:3274818‑M1/25‑1 (MQ=255) tgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagta > 1:5404434‑M1/26‑51 (MQ=255) ccccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttgga < 1:5105650‑M1/51‑24 (MQ=255) ccccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttgga < 1:3582772‑M1/51‑24 (MQ=255) tccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAgtaaagtaaa > 1:96578‑M1/24‑51 (MQ=255) tccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAgtaaagtaaa < 1:3148382‑M1/28‑1 (MQ=255) ccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacg < 1:7070214‑M1/51‑26 (MQ=255) ccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAAc > 1:7099073‑M1/23‑51 (MQ=255) cAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacga > 1:2530275‑M1/1‑25 (MQ=255) aGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgat < 1:5058740‑M1/51‑28 (MQ=255) aGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgat > 1:5012822‑M1/1‑24 (MQ=255) tCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatga > 1:2022031‑M1/1‑22 (MQ=255) tCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatga < 1:6540820‑M1/51‑30 (MQ=255) actttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCt > 1:5656978‑M1/20‑51 (MQ=255) cGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaa < 1:5853860‑M1/51‑31 (MQ=255) cGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaa < 1:591233‑M1/51‑31 (MQ=255) tttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTc < 1:6921331‑M1/34‑1 (MQ=255) gAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaa < 1:6227658‑M1/51‑32 (MQ=255) ttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt < 1:3831001‑M1/35‑1 (MQ=255) aGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaat > 1:3763815‑M1/1‑19 (MQ=255) aGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaat < 1:2641311‑M1/51‑33 (MQ=255) tttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg < 1:7242590‑M1/36‑1 (MQ=255) ggAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatg > 1:5125193‑M1/1‑18 (MQ=255) ggAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatg < 1:6374983‑M1/51‑34 (MQ=255) ttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTgg > 1:6415625‑M1/15‑51 (MQ=255) gAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgg < 1:6740511‑M1/51‑35 (MQ=255) tggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGc < 1:2366637‑M1/38‑1 (MQ=255) aaTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgga > 1:6260375‑M1/1‑16 (MQ=255) aaTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgga < 1:6063538‑M1/51‑36 (MQ=255) ggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCg < 1:3574343‑M1/39‑1 (MQ=255) ggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCg < 1:6888037‑M1/39‑1 (MQ=255) aTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaa < 1:6350491‑M1/51‑37 (MQ=255) tGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaat < 1:603294‑M1/51‑38 (MQ=255) gggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGt > 1:4291001‑M1/12‑51 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:3048984‑M1/11‑51 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:3100818‑M1/11‑51 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:6728428‑M1/11‑51 (MQ=255) ggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGtt > 1:5290042‑M1/11‑51 (MQ=255) gtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTa > 1:3972841‑M1/10‑51 (MQ=255) ctctTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatag > 1:4721824‑M1/1‑12 (MQ=255) ctctTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatag > 1:5624569‑M1/1‑12 (MQ=255) tcttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:4272259‑M1/1‑11 (MQ=255) tcttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:1445294‑M1/1‑11 (MQ=255) cagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATc > 1:586664‑M1/8‑51 (MQ=255) ttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:4357001‑M1/1‑9 (MQ=255) gtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCaa > 1:4824341‑M1/6‑51 (MQ=255) gtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCaa < 1:7079420‑M1/46‑1 (MQ=255) tacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAAc > 1:3331883‑M1/5‑51 (MQ=255) ctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:7025571‑M1/1‑7 (MQ=255) ctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:3668530‑M1/51‑45 (MQ=255) ctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:1229651‑M1/51‑45 (MQ=255) tGTATTtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:2125975‑M1/1‑6 (MQ=255) tGTATTtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:4477778‑M1/1‑6 (MQ=255) acaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACt > 1:6351062‑M1/4‑51 (MQ=255) gTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:1268023‑M1/1‑5 (MQ=255) gTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:4566167‑M1/1‑5 (MQ=255) gTATTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:5960635‑M1/50‑46 (MQ=255) caATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTg > 1:1774630‑M1/3‑51 (MQ=255) caATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTg > 1:5712592‑M1/3‑51 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:2983027‑M1/51‑48 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:6678540‑M1/51‑48 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:1364150‑M1/1‑4 (MQ=255) tATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:6113511‑M1/51‑48 (MQ=255) aTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:6012797‑M1/51‑49 (MQ=255) aTTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCa < 1:1503295/51‑1 (MQ=255) | AAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCA > REL606/3841142‑3841242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |