| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,766,595 | IS150 (+) +3 bp | coding (1111‑1113/1206 nt) | gltS ← | glutamate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3766595 = | 0 (0.000) | 81 (1.040) | 56/98 | 0.1 | 100% | coding (1113/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3766597 | 0 (0.000) | 83 (1.040) | 52/100 | 0.2 | 100% | coding (1111/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 174 total aligned reads displayed.
CGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGC > REL606/3766547‑3766645 | cgcATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaaaa < 1:2408340/51‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc > 1:7116629‑M1/48‑51 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc < 1:469079‑M1/4‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg < 1:4988255‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg > 1:6229256‑M1/47‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg > 1:2216087‑M1/47‑51 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGc < 1:2560895‑M1/6‑1 (MQ=255) tGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtac > 1:217271‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCa > 1:6926172‑M1/44‑51 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCa < 1:853230‑M1/8‑1 (MQ=255) gACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtact < 1:5131901‑M1/51‑7 (MQ=255) gACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtact < 1:3388811‑M1/51‑7 (MQ=255) gACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtact < 1:4905593‑M1/51‑7 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtg < 1:1220697‑M1/10‑1 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtg > 1:5671132‑M1/42‑51 (MQ=255) aCGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactg < 1:891829‑M1/51‑8 (MQ=255) aCGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactg > 1:2756647‑M1/1‑44 (MQ=255) cGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgc < 1:608122‑M1/51‑9 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgtg > 1:1970875‑M1/40‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgtg > 1:2516643‑M1/40‑51 (MQ=255) gATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgca > 1:888301‑M1/1‑42 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGc < 1:5354737‑M1/13‑1 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGc > 1:6650396‑M1/39‑51 (MQ=255) tatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacc < 1:5139655‑M1/51‑12 (MQ=255) tatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacc > 1:3222327‑M1/1‑40 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCg > 1:1921563‑M1/38‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCg < 1:3968193‑M1/14‑1 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGAc < 1:5190054‑M1/16‑1 (MQ=255) cGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccat > 1:4136678‑M1/1‑37 (MQ=255) tgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACgg > 1:6459398‑M1/34‑51 (MQ=255) gATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccatt < 1:5689845‑M1/51‑16 (MQ=255) gtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACggg < 1:1162206‑M1/19‑1 (MQ=255) aTAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattt > 1:2999434‑M1/1‑35 (MQ=255) tttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGc > 1:2584555‑M1/32‑51 (MQ=255) ttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGcc < 1:6488872‑M1/21‑1 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:6302495‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:3022556‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg > 1:3322615‑M1/1‑33 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:729354‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:644147‑M1/51‑19 (MQ=255) taactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCa > 1:3497990‑M1/30‑51 (MQ=255) aaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgt > 1:2011759‑M1/1‑32 (MQ=255) aGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgtt < 1:998180‑M1/51‑21 (MQ=255) aGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgtt < 1:4189306‑M1/51‑21 (MQ=255) gAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttg > 1:5306598‑M1/1‑30 (MQ=255) actgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCaaa > 1:3580477‑M1/28‑51 (MQ=255) actgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCaaa < 1:6157124‑M1/24‑1 (MQ=255) aaCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttgg > 1:5934650‑M1/1‑29 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:2176959‑M1/26‑51 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:1329394‑M1/26‑51 (MQ=255) aCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttgga > 1:2825694‑M1/1‑28 (MQ=255) gtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCg < 1:462654‑M1/27‑1 (MQ=255) cGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggac < 1:4525811‑M1/51‑25 (MQ=255) cGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggac > 1:2888358‑M1/1‑27 (MQ=255) gCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacg < 1:4175098‑M1/51‑26 (MQ=255) ccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGtt > 1:6219972‑M1/23‑51 (MQ=255) ccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGtt < 1:607827‑M1/29‑1 (MQ=255) cACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacga > 1:2462853‑M1/1‑25 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCaa > 1:2501953‑M1/22‑44 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTc < 1:3141691‑M1/30‑1 (MQ=255) aCCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgat < 1:5958560‑M1/51‑28 (MQ=255) ccGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatg > 1:6634826‑M1/1‑23 (MQ=255) aactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCa < 1:642161‑M1/31‑1 (MQ=255) actttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAg < 1:6109261‑M1/32‑1 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:4341526‑M1/1‑21 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:925194‑M1/1‑21 (MQ=255) ctttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGt > 1:3656‑M1/19‑51 (MQ=255) ctttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGt < 1:5955958‑M1/33‑1 (MQ=255) aCCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaa < 1:2423942‑M1/51‑32 (MQ=255) ttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGa > 1:3097873‑M1/17‑51 (MQ=255) ttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGa > 1:4825826‑M1/17‑51 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaat < 1:1310184‑M1/51‑33 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaat < 1:5507074‑M1/51‑33 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt < 1:1083331‑M1/36‑1 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt < 1:4234562‑M1/36‑1 (MQ=255) cATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatg < 1:1839299‑M1/51‑34 (MQ=255) cATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatg > 1:3172009‑M1/1‑18 (MQ=255) cATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatg > 1:4368581‑M1/1‑18 (MQ=255) ttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATc < 1:2380319‑M1/37‑1 (MQ=255) aTCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatgg < 1:1569886‑M1/51‑35 (MQ=255) tggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCg < 1:4750394‑M1/38‑1 (MQ=255) ggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCt < 1:3827159‑M1/41‑1 (MQ=255) caccacCAAAAAtgtactgcacccattttgttggacgatgaaatggaatag > 1:6830373‑M1/1‑12 (MQ=255) caccacCAAAAAtgtactgcacccattttgttggacgatgaaatggaatag > 1:6352329‑M1/1‑12 (MQ=255) caccacCAAAAAtgtactgcacccattttgttggacgatgaaatggaatag > 1:1427778‑M1/1‑12 (MQ=255) tcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGc < 1:7153855‑M1/43‑1 (MQ=255) caccaAAAAtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:1563471‑M1/1‑9 (MQ=255) accaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccc < 1:4454157‑M1/51‑44 (MQ=255) accaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccc < 1:1855184‑M1/51‑44 (MQ=255) ccaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:541722‑M1/51‑45 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:159638‑M1/51‑46 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:5358049‑M1/1‑6 (MQ=255) acaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGtt < 1:4677144‑M1/48‑1 (MQ=255) caAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTg < 1:6023983‑M1/49‑1 (MQ=255) aaaaatgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:5086199‑M1/51‑47 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg < 1:2760096‑M1/50‑1 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg < 1:5836644‑M1/50‑1 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg > 1:13730‑M1/2‑51 (MQ=255) aaaCGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGc < 1:5041883/51‑1 (MQ=255) aaaCGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGc > 1:3506421/1‑51 (MQ=255) | CGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGC > REL606/3766547‑3766645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |