| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,766,595 | IS150 (+) +3 bp | coding (1111‑1113/1206 nt) | gltS ← | glutamate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3766595 = | 0 (0.000) | 81 (1.040) | 56/98 | 0.1 | 100% | coding (1113/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3766597 | 0 (0.000) | 83 (1.040) | 52/100 | 0.2 | 100% | coding (1111/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 180 total aligned reads displayed.
AGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGC > REL606/3766545‑3766645 | aGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaa < 1:6328079/51‑1 (MQ=255)aGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaa > 1:6403947/1‑51 (MQ=255) gcgcATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaaa < 1:563955/51‑1 (MQ=255) cgcATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaaaa < 1:2408340/51‑1 (MQ=255) cgcATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaaaa < 1:4382562/51‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc < 1:6113454‑M1/4‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc < 1:5486818‑M1/4‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc < 1:469079‑M1/4‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg > 1:6229256‑M1/47‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg < 1:483618‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg < 1:3160208‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg < 1:4988255‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg > 1:2216087‑M1/47‑51 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGc < 1:4273443‑M1/6‑1 (MQ=255) tGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtac > 1:217271‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCa < 1:853230‑M1/8‑1 (MQ=255) gACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtact < 1:5131901‑M1/51‑7 (MQ=255) gACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtact < 1:3388811‑M1/51‑7 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtg < 1:1220697‑M1/10‑1 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtg > 1:5671132‑M1/42‑51 (MQ=255) aCGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactg > 1:2756647‑M1/1‑44 (MQ=255) aCGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactg < 1:891829‑M1/51‑8 (MQ=255) aCGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactg > 1:5097464‑M1/1‑44 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgt > 1:4144339‑M1/41‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgtg > 1:2516643‑M1/40‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgtg < 1:7090124‑M1/12‑1 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgtg > 1:1970875‑M1/40‑51 (MQ=255) gATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgca > 1:2642545‑M1/1‑42 (MQ=255) gATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgca > 1:3102681‑M1/1‑42 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGc > 1:6650396‑M1/39‑51 (MQ=255) atatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgc > 1:1402738‑M1/1‑41 (MQ=255) tatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacc > 1:3222327‑M1/1‑40 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCg > 1:1921563‑M1/38‑51 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCg < 1:5198868‑M1/14‑1 (MQ=255) atCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcaccc > 1:4178895‑M1/1‑39 (MQ=255) atCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcaccc < 1:5414615‑M1/51‑13 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGAc < 1:1306056‑M1/16‑1 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGAc < 1:1844297‑M1/16‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACgg > 1:5160872‑M1/34‑51 (MQ=255) gATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccatt < 1:5689845‑M1/51‑16 (MQ=255) gtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACggg < 1:1162206‑M1/19‑1 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:3022556‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:729354‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:644147‑M1/51‑19 (MQ=255) taactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCa > 1:3497990‑M1/30‑51 (MQ=255) aaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgt > 1:2011759‑M1/1‑32 (MQ=255) aGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgtt < 1:4189306‑M1/51‑21 (MQ=255) aGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgtt < 1:998180‑M1/51‑21 (MQ=255) ctgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAg < 1:3334183‑M1/25‑1 (MQ=255) aaCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttgg > 1:5934650‑M1/1‑29 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:305467‑M1/26‑51 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:2176959‑M1/26‑51 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:1329394‑M1/26‑51 (MQ=255) aCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttgga < 1:2805727‑M1/51‑24 (MQ=255) cGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggac < 1:4525811‑M1/51‑25 (MQ=255) cGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggac < 1:6606088‑M1/51‑25 (MQ=255) tccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGt < 1:5072092‑M1/28‑1 (MQ=255) ccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGtt < 1:607827‑M1/29‑1 (MQ=255) cACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacga > 1:2462853‑M1/1‑25 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCaa > 1:2501953‑M1/22‑44 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTc < 1:4366810‑M1/30‑1 (MQ=255) aCCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgat > 1:4637808‑M1/1‑24 (MQ=255) ccGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatg < 1:3654144‑M1/51‑29 (MQ=255) aactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCa > 1:330824‑M1/21‑51 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:2436404‑M1/1‑21 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:925194‑M1/1‑21 (MQ=255) ctttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGt < 1:5955958‑M1/33‑1 (MQ=255) ctttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGt > 1:3656‑M1/19‑51 (MQ=255) aCCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaa < 1:6088826‑M1/51‑32 (MQ=255) ttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGa > 1:4825826‑M1/17‑51 (MQ=255) ttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGa < 1:6446306‑M1/35‑1 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaat < 1:453949‑M1/51‑33 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaa < 1:6195354‑M1/50‑32 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt < 1:1083331‑M1/36‑1 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt > 1:2866713‑M1/16‑51 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt < 1:533897‑M1/36‑1 (MQ=255) cATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatg > 1:6864007‑M1/1‑18 (MQ=255) cATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatg < 1:1839299‑M1/51‑34 (MQ=255) ttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATc > 1:2998814‑M1/15‑51 (MQ=255) ttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATc < 1:2380319‑M1/37‑1 (MQ=255) aTCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatgg < 1:1569886‑M1/51‑35 (MQ=255) tggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCg < 1:4750394‑M1/38‑1 (MQ=255) tCGGCACCACCAAAAAtgttctgcacccattttgttggacgatgaa < 1:2574459‑M1/46‑31 (MQ=255) ggCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaat < 1:6480393‑M1/51‑38 (MQ=255) ggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCt < 1:3827159‑M1/41‑1 (MQ=255) caccacCAAAAAtgtactgcacccattttgttggacgatgaaatggaatag > 1:6830373‑M1/1‑12 (MQ=255) caccacCAAAAAtgtactgcacccattttgttggacgatgaaatggaatag > 1:6352329‑M1/1‑12 (MQ=255) tcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGc < 1:7153855‑M1/43‑1 (MQ=255) cagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCa < 1:866172‑M1/44‑1 (MQ=255) agtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCAt < 1:6295884‑M1/45‑1 (MQ=255) gtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATg < 1:3537930‑M1/46‑1 (MQ=255) accaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccc > 1:4007121‑M1/1‑8 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:159638‑M1/51‑46 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:5358049‑M1/1‑6 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:5972518‑M1/51‑46 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:1528601‑M1/1‑6 (MQ=255) aaaaatgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:6048181‑M1/1‑5 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg > 1:13730‑M1/2‑51 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg < 1:5836644‑M1/50‑1 (MQ=255) aaaCGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGc < 1:5041883/51‑1 (MQ=255) | AGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGC > REL606/3766545‑3766645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |