| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,766,595 | IS150 (+) +3 bp | coding (1111‑1113/1206 nt) | gltS ← | glutamate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3766595 = | 0 (0.000) | 81 (1.040) | 56/98 | 0.1 | 100% | coding (1113/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3766597 | 0 (0.000) | 83 (1.040) | 52/100 | 0.2 | 100% | coding (1111/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
CCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3766644‑3766595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT < REL606/3894996‑3894950 CCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTT < 1:5836644/51‑1CCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTT < 1:2760096/51‑1CCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTT > 1:13730/1‑51 CAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTG < 1:6023983/51‑1 AACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGT < 1:4677144/51‑1 ACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTA < 1:7201455/51‑1 CATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTAC < 1:3537930/51‑1 ATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACT > 1:595414/1‑51 ATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACT < 1:6295884/51‑1 TGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTG < 1:866172/51‑1 TGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTG < 1:4791179/51‑1 GCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGA < 1:7153855/51‑1 AGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACC < 1:3827159/51‑1 AGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACC > 1:955839/1‑51 CGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCA < 1:4750394/51‑1 GATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAA < 1:2380319/51‑1 GATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAA > 1:2998814/1‑51 ATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAA < 1:1083331/51‑1 ATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAA < 1:4234562/51‑1 ATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAA < 1:533897/51‑1 ATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAA > 1:2866713/1‑51 TCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAA > 1:3097873/1‑51 TCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAA > 1:4825826/1‑51 TCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAA > 1:249889/1‑51 TCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAA < 1:6446306/51‑1 ACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAG > 1:3656/1‑51 ACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAG < 1:5955958/51‑1 CTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGT < 1:6109261/51‑1 TGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTT > 1:330824/1‑51 TGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTT < 1:642161/51‑1 GAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTG < 1:3141691/51‑1 GAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTG < 1:4366810/51‑1 AACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGG < 1:607827/51‑1 AACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGG > 1:6219972/1‑51 ACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGA < 1:2083106/51‑1 ACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGA < 1:5072092/51‑1 CGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGAC < 1:462654/51‑1 GCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACA > 1:2176959/1‑51 GCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACA > 1:305467/1‑51 GCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACA > 1:1329394/1‑51 CTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAG < 1:3334183/51‑1 CTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAG > 1:4711631/1‑51 TTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGT < 1:6157124/51‑1 TTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGT > 1:3580477/1‑51 TTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTG > 1:2501953/1‑44 TGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:3497990/1‑51 GGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAA < 1:6488872/51‑1 GGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAA < 1:1202050/51‑1 GCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA > 1:3486292/1‑51 GCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA > 1:2584555/1‑51 CCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:1162206/51‑1 CCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:6459398/1‑51 CCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:5160872/1‑51 GTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:5190054/51‑1 GTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:1844297/51‑1 GTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:1306056/51‑1 TCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA < 1:2375433/51‑1 CGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG < 1:5198868/51‑1 CGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG > 1:1921563/1‑51 CGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA < 1:3968193/50‑1 GCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG < 1:5354737/51‑1 GCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG > 1:6650396/1‑51 CACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC > 1:2516643/1‑51 CACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC < 1:7090124/51‑1 CACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC > 1:1970875/1‑51 ACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA > 1:4144339/1‑51 CATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT > 1:5671132/1‑51 CATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT < 1:1220697/51‑1 TGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:2515161/51‑1 TGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT > 1:6926172/1‑51 TGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:853230/51‑1 TGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:6787582/51‑1 GCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 1:2560895/51‑1 GCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 1:4273443/51‑1 CGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG > 1:2216087/1‑51 CGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG > 1:6229256/1‑51 CGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 1:483618/51‑1 CGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 1:3160208/51‑1 CGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 1:378620/51‑1 CGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 1:4988255/51‑1 GTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 1:7116629/1‑51 GTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT < 1:469079/51‑1 GTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT < 1:5486818/51‑1 GTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT < 1:6113454/51‑1 CCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3766644‑3766595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT < REL606/3894996‑3894950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |