| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,537,178 | +GTACTGACCCCAAAA :: IS150 (–) :: +CAA | coding (40/2199 nt) | zntA → | zinc, cobalt and lead efflux system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666133 | NA (NA) | 67 (1.110) +TGGGGTCAGTAC |
43/76 | 0.1 | 100% | pseudogene (355/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 |
| ? | REL606 | = 3537178 | 0 (0.000) | coding (40/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
| * | ? | REL606 | 3537179 = | 0 (0.000) | 82 (1.100) +TTG |
52/94 | 0.1 | 100% | coding (41/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑TTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCA > REL606/666092‑666180 | gCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCtt < 1:997936/51‑1 (MQ=14)gCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCtt < 1:448683/51‑1 (MQ=14) ccTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttt > 1:1434745/1‑51 (MQ=14) cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCtttt > 1:2881652/1‑51 (MQ=17) tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttttt < 1:6615816/51‑1 (MQ=17) tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttttt < 1:5099631/51‑1 (MQ=17) tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttttt > 1:7179897/1‑51 (MQ=17) tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttttt > 1:1934377/1‑51 (MQ=17) cGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTc > 1:6792164/1‑51 (MQ=17) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCAc > 1:4827349/1‑51 (MQ=18) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCAc < 1:5168681/51‑1 (MQ=18) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCAc < 1:2012718/51‑1 (MQ=18) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCAc > 1:2384194/1‑51 (MQ=18) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCAc > 1:333166/1‑51 (MQ=18) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCAc > 1:6601617/1‑51 (MQ=18) gtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACg > 1:84205/1‑51 (MQ=18) tttAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGa < 1:1023650/51‑1 (MQ=18) tttAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGa < 1:3217572/51‑1 (MQ=18) tttAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGa > 1:4479159/1‑51 (MQ=18) ttAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTc < 1:6864998/46‑1 (MQ=18) ttAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAg < 1:4552814/51‑1 (MQ=21) ttAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAg > 1:834322/1‑51 (MQ=21) ttAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAg > 1:1961249/1‑51 (MQ=21) tAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGc > 1:4106993/1‑51 (MQ=21) tAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGc > 1:1603083/1‑51 (MQ=21) aCTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCg < 1:5959410/51‑1 (MQ=25) tGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCgg < 1:5264045/50‑1 (MQ=25) tGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgc > 1:3125213/1‑51 (MQ=25) tGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgc < 1:3638213/51‑1 (MQ=25) tGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgc < 1:4179080/51‑1 (MQ=25) tGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgc < 1:2395099/51‑1 (MQ=25) tGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgc < 1:6169288/51‑1 (MQ=25) tGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgc > 1:4247414/1‑51 (MQ=25) gTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgcg > 1:886532/1‑51 (MQ=25) gTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgcg > 1:4146389/1‑51 (MQ=25) gTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGgcg > 1:7000270/1‑51 (MQ=25) aaCTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCttt < 1:1170625/51‑1 (MQ=38) aCTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTa > 1:4812027/1‑51 (MQ=38) cTTTTTGGGGTCAGTACATTTTCAGGGTTTTTTCACGAGCCGGCGCttt < 1:2709305/49‑1 (MQ=37) tttttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATc > 1:4367519/1‑51 (MQ=38) tttttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATc > 1:6456867/1‑51 (MQ=38) ttttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATcg > 1:4822934/1‑51 (MQ=39) ttttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATcg > 1:5429993/1‑51 (MQ=39) ttttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATcg < 1:6296160/51‑1 (MQ=39) tttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATcgc > 1:881823/1‑51 (MQ=255) ttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATcgcg > 1:6521583/1‑51 (MQ=255) tGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGt < 1:6921465/51‑1 (MQ=255) ggTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTa < 1:4372546/51‑1 (MQ=255) gTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTaa < 1:1118518/51‑1 (MQ=255) tCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAg > 1:1194321/1‑51 (MQ=255) tCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAg < 1:3471592/51‑1 (MQ=255) tCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAg < 1:7199754/51‑1 (MQ=255) cAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGc > 1:158141/1‑51 (MQ=255) cAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGc < 1:366655/51‑1 (MQ=255) cAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGc > 1:1214990/1‑51 (MQ=255) gTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCAc < 1:1828050/51‑1 (MQ=255) tacattttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACt > 1:5053943/6‑51 (MQ=255) acattttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACtt < 1:6154015/47‑1 (MQ=255) acattttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACtt > 1:879123/5‑51 (MQ=255) cattttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACttt < 1:6553703/48‑1 (MQ=255) cattttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACttt > 1:6191575/4‑51 (MQ=255) cattttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACttt > 1:334635/4‑51 (MQ=255) attttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTc < 1:136342/49‑1 (MQ=255) attttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTc > 1:6512795/3‑51 (MQ=255) ttttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCa < 1:6338214/50‑1 (MQ=255) ttttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCa < 1:5904792/50‑1 (MQ=255) ttttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCa > 1:593944/2‑51 (MQ=255) | GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑TTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCA > REL606/666092‑666180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |