| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,537,178 | +GTACTGACCCCAAAA :: IS150 (–) :: +CAA | coding (40/2199 nt) | zntA → | zinc, cobalt and lead efflux system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666133 | NA (NA) | 67 (1.110) +TGGGGTCAGTAC |
43/76 | 0.1 | 100% | pseudogene (355/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 |
| ? | REL606 | = 3537178 | 0 (0.000) | coding (40/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
| * | ? | REL606 | 3537179 = | 0 (0.000) | 82 (1.100) +TTG |
52/94 | 0.1 | 100% | coding (41/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3537228‑3537179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > REL606/3651091‑3651138 ||| GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAAT < 1:6151295/51‑1 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT < 1:2540025/51‑1 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT < 1:6528322/51‑1 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT < 1:4156906/51‑1 AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG < 1:6134932/51‑1 AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG > 1:3119826/1‑51 AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG < 1:5590812/51‑1 ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT < 1:3929593/51‑1 ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT < 1:483689/51‑1 ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT > 1:6809231/1‑51 CAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTG > 1:114127/1‑51 AGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGT < 1:5762515/51‑1 GTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTA > 1:4012898/1‑51 CGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTA < 1:1421380/49‑1 GTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTG > 1:6782202/1‑51 GTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTG > 1:4557107/1‑51 TTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGC < 1:1959689/51‑1 TTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGC < 1:5556377/51‑1 TGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCA > 1:5099978/1‑51 CGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCC < 1:2391662/51‑1 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA < 1:3390405/51‑1 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA > 1:26496/1‑51 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA > 1:687592/1‑51 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA > 1:185807/1‑51 CTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTT > 1:1477156/1‑51 CTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTT > 1:2696334/1‑51 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT < 1:4616422/51‑1 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT < 1:3487695/51‑1 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT < 1:4897346/51‑1 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT > 1:3952249/1‑51 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT > 1:3395700/1‑51 GTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTG < 1:2316828/51‑1 ACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTT < 1:6095220/51‑1 CCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTG < 1:5742454/51‑1 CCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTG < 1:3026789/51‑1 CCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTG < 1:3698924/51‑1 CGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGG > 1:4293166/1‑51 CGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGG < 1:128862/51‑1 TGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGAC < 1:6588922/51‑1 TGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGAC < 1:7231553/51‑1 TGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGAC < 1:2615746/51‑1 GGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACG < 1:5392971/51‑1 GGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACG < 1:1162814/51‑1 GTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGA < 1:1169224/51‑1 GTTAGCGGGTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGA < 1:1499571/51‑1 TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT > 1:7274704/1‑51 TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT > 1:5928440/1‑51 TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT < 1:7045272/51‑1 TAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATG < 1:2600258/51‑1 AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA < 1:1358838/51‑1 AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA > 1:2114883/1‑51 AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA > 1:6742257/1‑51 AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA > 1:2207609/1‑51 GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:6334870/51‑1 GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:5362587/51‑1 GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:1150888/51‑1 CGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAA < 1:2199350/51‑1 GGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:5941260/51‑1 GGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:5076185/51‑1 GTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:1583395/1‑51 TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:2627140/51‑1 TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:2234398/51‑1 TTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:4175017/1‑51 TTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA < 1:3401903/51‑1 TGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 1:2916184/1‑51 TGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 1:4103595/1‑51 TGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:4243428/51‑1 GAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 1:4033393/1‑51 AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA > 1:5648552/1‑51 AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA > 1:4563677/1‑51 AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA > 1:1300892/1‑51 AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:1916091/51‑1 AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:186166/51‑1 ACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 1:5660447/51‑1 CGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:1327011/1‑51 GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:4884367/1‑51 GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:2095238/1‑51 GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC < 1:2610878/51‑1 CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:3937860/1‑51 CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC < 1:6457421/51‑1 CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC < 1:88910/51‑1 CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:4530193/1‑51 AGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC > 1:4593727/1‑51 GCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC < 1:5544150/50‑1 CAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:5634710/51‑1 CAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:5449543/51‑1 AATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA < 1:3640362/51‑1 AATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 1:7102325/1‑51 ATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:3454309/1‑51 TTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:3619141/1‑51 TTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:5826624/51‑1 ||| GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3537228‑3537179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > REL606/3651091‑3651138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |