Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 3,537,178 +GTACTGACCCCAAAA :: IS150 (–) :: +CAA coding (40/2199 nt) zntA → zinc, cobalt and lead efflux system

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 666133NA (NA)67 (1.110)
+TGGGGTCAGTAC
43/76 0.1 100% pseudogene (355/387 nt) gltL ATP‑binding protein of glutamate/aspartate transport system; b0652_1
?REL606 = 3537178 0 (0.000)coding (40/2199 nt) zntA zinc, cobalt and lead efflux system
* ? REL606 3537179 =0 (0.000)82 (1.100)
+TTG
52/94 0.1 100% coding (41/2199 nt) zntA zinc, cobalt and lead efflux system
?REL606 3651091 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

Only 100 of 107 total aligned reads displayed.

CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/666085‑666133
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC  <  REL606/3537178‑3537129
                                                 ||||||||||||                                                  
 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGG                                                             <  1:1880449/51‑1
 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGG                                                             >  1:7254883/1‑51
  TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGG                                                            >  1:2439048/1‑51
   ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGG                                                           <  1:4584767/51‑1
   ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGG                                                           >  1:1687022/1‑51
   ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGG                                                           >  1:701442/1‑51
    TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGT                                                          >  1:6546857/1‑51
     ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTC                                                         <  1:5207480/51‑1
      TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCA                                                        <  1:6933857/51‑1
        CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGT                                                      >  1:5828709/1‑51
         CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTA                                                     >  1:37578/1‑51
         CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTA                                                     >  1:6162962/1‑51
         CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTA                                                     <  1:2853550/51‑1
          TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTAC                                                    >  1:7270398/1‑51
          TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTAC                                                    <  1:2951659/51‑1
            GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT                                                  <  1:5454726/51‑1
            GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT                                                  >  1:4405248/1‑51
            GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT                                                  <  1:2795535/51‑1
             TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT                                                 <  1:1107491/51‑1
             TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT                                                 >  1:6576803/1‑51
             TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT                                                 <  1:5266731/51‑1
              GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTG                                                <  1:4655337/51‑1
               TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGA                                               >  1:7242654/1‑51
                TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG                                              >  1:88725/1‑51
                TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG                                              <  1:5328825/51‑1
                TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG                                              <  1:6419019/51‑1
                TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG                                              >  1:3591568/1‑51
                TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACA                                                   <  1:6073842/46‑1
                TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACA                                                   <  1:3314191/46‑1
                 TAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGG                                             >  1:4765598/1‑51
                 TAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGG                                             <  1:5882547/51‑1
                 TAACTGTCCAACTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGG                                            <  1:2877571/51‑1
                  AACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGG                                            <  1:3623579/51‑1
                   ACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGG                                           <  1:3033453/51‑1
                   ACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGG                                           <  1:6184104/51‑1
                    CTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGC                                          <  1:239003/51‑1
                     TGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCT                                         >  1:5994249/1‑51
                     TGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCT                                         <  1:4172863/51‑1
                      GTCCACCTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTT                                        <  1:3632949/51‑1
                        CCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTC                                      >  1:6391473/1‑51
                        CCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTC                                      >  1:1900516/1‑51
                        CCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTT                                        >  1:4523175/1‑49
                         CAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCT                                     <  1:3947045/51‑1
                          AACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTT                                    <  1:1667783/51‑1
                          AACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTT                                    <  1:1395530/51‑1
                            CTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGC                                  >  1:5588614/1‑51
                             TTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCC                                 >  1:4131671/1‑51
                             TTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCC                                 <  1:673712/51‑1
                              TTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCG                                >  1:3442041/1‑51
                               TTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGT                               >  1:1474374/1‑51
                                 TGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGA                             <  1:1686836/51‑1
                                 TGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGA                             >  1:5999223/1‑51
                                 TGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCG                                >  1:1380646/1‑48
                                   GGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATT                           <  1:4616239/51‑1
                                   GGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATT                           <  1:733909/51‑1
                                    GGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTG                          <  1:1831518/51‑1
                                    GGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTG                          <  1:7038143/51‑1
                                       CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA                       <  1:2133761/51‑1
                                       CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA                       >  1:6930926/1‑51
                                       CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA                       <  1:133699/51‑1
                                       CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTC                        >  1:7152659/1‑50
                                        AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG                      >  1:4592469/1‑51
                                        AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG                      >  1:3646139/1‑51
                                        AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG                      >  1:869308/1‑51
                                        AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG                      <  1:1339847/51‑1
                                          TACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGA                    <  1:1989183/51‑1
                                          TACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGA                    >  1:4054339/1‑51
                                           ACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAG                   <  1:1230249/51‑1
                                            CATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGT                  <  1:2774619/51‑1
                                             ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC                 <  1:4069828/51‑1
                                             ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC                 >  1:7149230/1‑51
                                             ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC                 <  1:5652769/51‑1
                                             ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC                 >  1:1484452/1‑51
                                              TTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCG                <  1:2323111/51‑1
                                              TTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCG                <  1:6834997/51‑1
                                               TTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGA               >  1:3844638/1‑51
                                               TTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGA               >  1:6459770/1‑51
                                                TTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC              <  1:1342280/51‑1
                                                TTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC              <  1:3715173/51‑1
                                                 TGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACA             >  1:5204495/1‑51
                                                 TGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC              >  1:6777194/1‑50
                                                  GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT            <  1:1404621/51‑1
                                                  GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT            >  1:208816/1‑51
                                                  GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT            <  1:5249490/51‑1
                                                   GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG           <  1:1087318/51‑1
                                                   GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG           >  1:5039772/1‑51
                                                   GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG           <  1:5413873/51‑1
                                                   GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG           <  1:7013074/51‑1
                                                    GGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGG          <  1:4402787/51‑1
                                                     GTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGC         <  1:5280422/51‑1
                                                      TCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGGCGACA             >  1:4907343/1‑46
                                                       CAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCAT       >  1:7143536/1‑51
                                                        AGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATC      <  1:2607468/51‑1
                                                          TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT    <  1:1756537/51‑1
                                                          TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT    <  1:382861/51‑1
                                                          TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT    <  1:446010/51‑1
                                                           ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC   <  1:5825245/51‑1
                                                           ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC   >  1:3489236/1‑51
                                                           ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC   >  1:5277306/1‑51
                                                            CATTGAGGGGTTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC  <  1:6067301/51‑1
                                                 ||||||||||||                                                  
CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/666085‑666133
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC  <  REL606/3537178‑3537129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.