Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
JC JC | REL606 | 3,537,178 | +GTACTGACCCCAAAA :: IS150 (–) :: +CAA | coding (40/2199 nt) | zntA → | zinc, cobalt and lead efflux system |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 666133 | NA (NA) | 67 (1.110) +TGGGGTCAGTAC |
43/76 | 0.1 | 100% | pseudogene (355/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 |
? | REL606 | = 3537178 | 0 (0.000) | coding (40/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
* | ? | REL606 | 3537179 = | 0 (0.000) | 82 (1.100) +TTG |
52/94 | 0.1 | 100% | coding (41/2199 nt) | zntA | zinc, cobalt and lead efflux system |
? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
Only 100 of 107 total aligned reads displayed.
CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666085‑666133 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC < REL606/3537178‑3537129 |||||||||||| CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGG < 1:1880449/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGG > 1:7254883/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGG > 1:2439048/1‑51 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGG < 1:4584767/51‑1 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGG > 1:1687022/1‑51 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGG > 1:701442/1‑51 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGT > 1:6546857/1‑51 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTC < 1:5207480/51‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCA < 1:6933857/51‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGT > 1:5828709/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTA > 1:37578/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTA > 1:6162962/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTA < 1:2853550/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTAC > 1:7270398/1‑51 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTAC < 1:2951659/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT < 1:5454726/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT > 1:4405248/1‑51 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT < 1:2795535/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT < 1:1107491/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT > 1:6576803/1‑51 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT < 1:5266731/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTG < 1:4655337/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGA > 1:7242654/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG > 1:88725/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG < 1:5328825/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG < 1:6419019/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG > 1:3591568/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACA < 1:6073842/46‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACA < 1:3314191/46‑1 TAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGG > 1:4765598/1‑51 TAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGG < 1:5882547/51‑1 TAACTGTCCAAC‑TTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGG < 1:2877571/51‑1 AACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGG < 1:3623579/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGG < 1:3033453/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGG < 1:6184104/51‑1 CTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGC < 1:239003/51‑1 TGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCT > 1:5994249/1‑51 TGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCT < 1:4172863/51‑1 GTCCACCTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTT < 1:3632949/51‑1 CCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTC > 1:6391473/1‑51 CCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTC > 1:1900516/1‑51 CCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTT > 1:4523175/1‑49 CAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCT < 1:3947045/51‑1 AACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTT < 1:1667783/51‑1 AACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTT < 1:1395530/51‑1 CTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGC > 1:5588614/1‑51 TTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCC > 1:4131671/1‑51 TTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCC < 1:673712/51‑1 TTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCG > 1:3442041/1‑51 TTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGT > 1:1474374/1‑51 TGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGA < 1:1686836/51‑1 TGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGA > 1:5999223/1‑51 TGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCG > 1:1380646/1‑48 GGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATT < 1:4616239/51‑1 GGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATT < 1:733909/51‑1 GGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTG < 1:1831518/51‑1 GGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTG < 1:7038143/51‑1 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA < 1:2133761/51‑1 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA > 1:6930926/1‑51 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA < 1:133699/51‑1 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTC > 1:7152659/1‑50 AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG > 1:4592469/1‑51 AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG > 1:3646139/1‑51 AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG > 1:869308/1‑51 AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG < 1:1339847/51‑1 TACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGA < 1:1989183/51‑1 TACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGA > 1:4054339/1‑51 ACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAG < 1:1230249/51‑1 CATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGT < 1:2774619/51‑1 ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC < 1:4069828/51‑1 ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC > 1:7149230/1‑51 ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC < 1:5652769/51‑1 ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC > 1:1484452/1‑51 TTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCG < 1:2323111/51‑1 TTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCG < 1:6834997/51‑1 TTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGA > 1:3844638/1‑51 TTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGA > 1:6459770/1‑51 TTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC < 1:1342280/51‑1 TTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC < 1:3715173/51‑1 TGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACA > 1:5204495/1‑51 TGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC > 1:6777194/1‑50 GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT < 1:1404621/51‑1 GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT > 1:208816/1‑51 GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT < 1:5249490/51‑1 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG < 1:1087318/51‑1 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG > 1:5039772/1‑51 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG < 1:5413873/51‑1 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG < 1:7013074/51‑1 GGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGG < 1:4402787/51‑1 GTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGC < 1:5280422/51‑1 TCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGGCGACA > 1:4907343/1‑46 CAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCAT > 1:7143536/1‑51 AGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATC < 1:2607468/51‑1 TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT < 1:1756537/51‑1 TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT < 1:382861/51‑1 TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT < 1:446010/51‑1 ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC < 1:5825245/51‑1 ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC > 1:3489236/1‑51 ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC > 1:5277306/1‑51 CATTGAGGGGTTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC < 1:6067301/51‑1 |||||||||||| CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666085‑666133 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC < REL606/3537178‑3537129 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |