| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,415,710 | IS150 (–) +3 bp | coding (848‑850/1413 nt) | cycA → | D‑alanine/D‑serine/glycine transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 79 (0.990) | 57/100 | 0.1 | 94.9% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 4415710 = | 4 (0.050) | coding (848/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter | |||||
| * | ? | REL606 | = 3894996 | NA (NA) | 96 (1.230) | 56/98 | 0.1 | 95.7% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4415712 | 4 (0.050) | coding (850/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter | |||||
TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893601‑3893554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > REL606/4415710‑4415759 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:1829456/51‑1TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG > 1:1012812/1‑51TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:846125/51‑1TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:475518/51‑1TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:712536/51‑1TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:1872996/51‑1TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTG < 1:5900866/51‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGT > 1:1548043/1‑51 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTT > 1:701154/1‑51 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTT > 1:218506/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAAC > 1:1493731/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAAC < 1:2369900/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTG < 1:3629721/51‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGT < 1:1521436/51‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGT > 1:1873981/1‑51 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT > 1:7022859/1‑51 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT < 1:502952/51‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTT < 1:2524145/51‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTC > 1:3080595/1‑51 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCG < 1:6039236/51‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCG > 1:288059/1‑51 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGT > 1:5870394/1‑51 CCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTG > 1:6466047/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGT > 1:2743329/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGT > 1:6045790/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGT > 1:214186/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGT < 1:3414025/51‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGT < 1:6685894/49‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTT > 1:6285778/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG > 1:4242162/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG < 1:2948766/51‑1 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG > 1:7265925/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGG > 1:4081904/1‑51 CATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTA > 1:3079897/1‑51 CATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTA < 1:407370/51‑1 ATCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAG < 1:4898413/51‑1 TCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGG > 1:870007/1‑51 TCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGG < 1:3457541/51‑1 TCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGG < 1:1169772/51‑1 TCGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGG < 1:710904/51‑1 CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG < 1:3335620/51‑1 CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG < 1:4951092/51‑1 CGTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGG > 1:2588273/1‑51 GTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGac > 1:5408898/1‑49 GTCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGC > 1:6354726/1‑51 TCCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCT < 1:477255/51‑1 CCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTG > 1:3752562/1‑51 CCAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTG < 1:7091499/51‑1 CAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGC > 1:6847250/1‑51 CAACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGC < 1:417974/51‑1 AACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCC > 1:1287827/1‑51 ACAAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCT < 1:6771507/51‑1 AAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGC > 1:1006969/1‑51 AAAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGC > 1:4193922/1‑51 AAATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCT < 1:5837640/51‑1 AATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTG < 1:1274952/51‑1 ATGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGC > 1:3842774/1‑51 TGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC < 1:5746875/51‑1 TGGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCC > 1:1125767/1‑51 GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG > 1:4097955/1‑51 GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG < 1:5731531/51‑1 GGGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG < 1:6754873/51‑1 GGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGC < 1:4369537/51‑1 GGTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGC < 1:6476915/51‑1 GTGCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCA < 1:1105861/51‑1 GCAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAG < 1:3473925/51‑1 CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC < 1:1810576/51‑1 CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGC < 1:7056622/51‑1 CAGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCG > 1:6526445/1‑46 AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG > 1:6566277/1‑51 AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG > 1:3249387/1‑51 AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG > 1:5474161/1‑51 AGTACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCG < 1:3201310/51‑1 GTACATTGTTGAACTGTTCGTGTTGGTAGGGCTACCTGCTGCCGCAAGCGT < 1:3165271/51‑1 TACATTGTTGAACTGTTCGTGTTGGTAGGGTTGCCTGCTGCCGCAAGCGTG > 1:5802353/1‑51 TACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG > 1:6425800/1‑51 TACATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTG < 1:4508527/51‑1 CATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGAT < 1:5339047/51‑1 ATTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > 1:6659936/1‑51 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893601‑3893554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATC > REL606/4415710‑4415759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |