| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2655704 | 0 (0.000) | 65 (0.830) | 42/98 | 0.7 | 100% | intergenic (‑123/+7) | clpB/yfiH | protein disaggregation chaperone/hypothetical protein |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2655655‑2655704‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > REL606/3651091‑3651134 GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT > 1:46669/1‑51GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT < 1:6618248/51‑1GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT < 1:6090658/51‑1GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT < 1:5038919/51‑1GACCAGATTAATGTGAAAAAAAAATCACGCGTACCGGATCGTCTTGATTCT < 1:1607992/51‑1 ACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTG < 1:4065448/51‑1 ACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT < 1:5685549/50‑1 CCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGT > 1:4849916/1‑51 CAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTA > 1:5442112/1‑51 CAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTA > 1:2709074/1‑51 AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTAC > 1:1001852/1‑51 AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTAC < 1:3296590/51‑1 GATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACT < 1:1969621/51‑1 GATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACT < 1:4350746/51‑1 ATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTG < 1:6436277/51‑1 AATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCAC > 1:5120825/1‑51 ATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACC > 1:5882577/1‑51 TGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCC > 1:2938527/1‑51 TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT < 1:1037150/51‑1 TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT < 1:2679354/51‑1 TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT > 1:5562310/1‑51 TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT < 1:6659143/51‑1 TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT > 1:6653621/1‑51 GAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATT < 1:2677444/51‑1 AAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTT < 1:69338/51‑1 AAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTT > 1:4370214/1‑51 AAAAGAAAACCCCGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTT < 1:398233/51‑1 AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT < 1:4917069/51‑1 AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT > 1:2574079/1‑51 AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT > 1:5641033/1‑51 AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT < 1:4592454/51‑1 AAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTG > 1:3501670/1‑51 AGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGT > 1:7225746/1‑51 AGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGT > 1:887331/1‑51 AAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGG > 1:6308335/1‑51 ATCACGCGTACCGGATCGTCTTGGTTCTGTTCTGCACCCATTTT > 1:2128553/1‑44 ATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGAC < 1:2691389/51‑1 ATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGAC < 1:5662257/51‑1 ATCACGCGTACCGGATCGTCTTGATTCTGTACTACACCCATTTTGTTGGAC < 1:3509908/51‑1 CACGCGTACCGGATCGTCTTGATTCTGTACTGCCCCCATTTTGTTGG > 1:972110/1‑47 CGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGAC < 1:1064968/47‑1 GCGTACCGGATCGTTTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA > 1:306565/1‑51 GCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA < 1:4893814/51‑1 GCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA < 1:1128656/51‑1 GCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA < 1:5103279/51‑1 GCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA > 1:7013163/1‑51 CGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAA < 1:2455775/51‑1 TACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:5274268/51‑1 TACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:2788494/1‑51 TACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:3075353/1‑51 CCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:3853599/1‑51 CCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:4070984/1‑51 CGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA < 1:1568064/51‑1 CGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:1197017/1‑51 CGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:1793552/1‑51 GATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:6023763/51‑1 ATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:938369/51‑1 TCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 1:1907125/51‑1 CGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC < 1:990032/51‑1 CGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC < 1:1701430/51‑1 CGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:2388584/1‑51 CGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:4891942/1‑51 TCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC < 1:759298/51‑1 TCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:487435/1‑51 TCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:90016/1‑51 CTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC < 1:4050935/51‑1 CTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC < 1:5131838/51‑1 CTTGATTCTGTACTGCACCCATTTTGTTGGACGACGAAATGGAATAGCCCC > 1:6143108/1‑51 TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT < 1:46611/51‑1 TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT < 1:4846876/51‑1 TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > 1:4741606/1‑51 GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2655655‑2655704‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > REL606/3651091‑3651134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |