New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2655704 | 0 (0.000) | 65 (0.830) | 42/98 | 0.7 | 100% | intergenic (‑123/+7) | clpB/yfiH | protein disaggregation chaperone/hypothetical protein |
? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
Only 100 of 236 total aligned reads displayed.
TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG > REL606/3651041‑3651140 | tCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:4236656/51‑1 (MQ=255) cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg > 1:6540938/1‑51 (MQ=255) cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg > 1:691804/1‑51 (MQ=255) cTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg > 1:5345069/1‑51 (MQ=255) tatcgcgcagctgtaagcggatatccgcaggcattttccagccggggcTGt > 1:2937917‑M1/49‑51 (MQ=255) tatcgcgcagctgtaagcggatatccgcaggcattttccagccggggcTGt < 1:5419565‑M1/3‑1 (MQ=255) tataTTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGt > 1:709825/1‑51 (MQ=255) atcgcgcagctgtaagcggatatccgcaggcattttccagccggggcTGTa > 1:6188039‑M1/48‑51 (MQ=255) atcgcgcagctgtaagcggatatccgcaggcattttccagccggggcTGTa > 1:6095175‑M1/48‑51 (MQ=255) atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa < 1:4482765/51‑1 (MQ=255) atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTa > 1:4541695/1‑51 (MQ=255) tatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTAc > 1:1893971/1‑51 (MQ=255) tatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTAc < 1:4702500/51‑1 (MQ=255) tatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTAc > 1:3952416/1‑51 (MQ=255) atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt > 1:1307992/1‑51 (MQ=255) atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACt > 1:2022358/1‑51 (MQ=255) tttCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTg > 1:6591212/1‑51 (MQ=255) tttCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTg > 1:1991556/1‑51 (MQ=255) gcgcagctgtaagcggatatccgcaggcattttccagccggggcTGTACTg > 1:4609225‑M1/45‑51 (MQ=255) ttCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGc > 1:1700896/1‑51 (MQ=255) cgcagctgtaagcggatatccgcaggcattttccagccggggcTGTACTGc > 1:5132735‑M1/44‑51 (MQ=255) cgcagctgtaagcggatatccgcaggcattttccagccggggcTGTACTGc < 1:4654844‑M1/8‑1 (MQ=255) tCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCa < 1:6047510/51‑1 (MQ=255) cTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCAc > 1:5202918/1‑51 (MQ=255) gctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCAccc > 1:677876‑M1/40‑51 (MQ=255) gctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCAcc < 1:2533307‑M1/11‑1 (MQ=255) ctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCACCCa > 1:6815700‑M1/39‑51 (MQ=255) ctgtaagcggatatccgcaggcattttccagccggggcTGTACTGCACCCa > 1:4906595‑M1/39‑51 (MQ=255) tgtaagcggatatccgcaggcattttccagccggggcTGTACTGCACCCAt > 1:390845‑M1/38‑51 (MQ=255) ggCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAt < 1:5742421/51‑1 (MQ=255) ggCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAt < 1:1206482/51‑1 (MQ=255) gtaagcggatatccgcaggcattttccagccggggcTGTACTGCACCCAtt < 1:7182272‑M1/15‑1 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAttt < 1:3235034/51‑1 (MQ=255) aagcggatatccgcaggcattttccagccggggcTGTACTGCACCCAtttt > 1:271976‑M1/35‑51 (MQ=255) aagcggatatccgcaggcattttccagccggggcTGTACTGCACCCAtttt < 1:4983928‑M1/17‑1 (MQ=255) aagcagatatccgcaggcattttccagccggggcTGTACTGCACCCAtttt > 1:5446230‑M1/35‑51 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCAtttt > 1:583708/1‑51 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttg < 1:4474261/51‑1 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgt > 1:142195/1‑51 (MQ=255) gcggatatccgcaggcattttccagccggggcTGTACTGCACCCATTttgt > 1:375671‑M1/33‑51 (MQ=255) cggatatccgcaggcattttccagccggggcTGTACTGCACCCATTttgtt < 1:1303860‑M1/20‑1 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgtt > 1:4976381/1‑51 (MQ=255) ggatatccgcaggcattttccagccggggcTGTACTGCACCCATTttgttg < 1:897076‑M1/21‑1 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgttg < 1:4989963/51‑1 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTttgttg > 1:4295359/1‑51 (MQ=255) atatccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGa > 1:2875717‑M1/29‑51 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGa < 1:2182586/51‑1 (MQ=255) tatccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGAc < 1:824209‑M1/24‑1 (MQ=255) cctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACg > 1:5615836/1‑51 (MQ=255) atccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACg > 1:4102879‑M1/27‑51 (MQ=255) atccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACg < 1:2965767‑M1/25‑1 (MQ=255) atccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACg > 1:6511669‑M1/27‑51 (MQ=255) atccgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACg > 1:1572235‑M1/27‑51 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGa > 1:6217511/1‑51 (MQ=255) cgcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATg > 1:2513872‑M1/24‑51 (MQ=255) gcaggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGa < 1:3278723‑M1/29‑1 (MQ=255) caggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaa < 1:4625507‑M1/30‑1 (MQ=255) caggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaa < 1:138504‑M1/30‑1 (MQ=255) aggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaaa > 1:147638‑M1/21‑51 (MQ=255) aggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGaaa < 1:5920162‑M1/31‑1 (MQ=255) ggcattttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAAt < 1:2317060‑M1/32‑1 (MQ=255) tGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGa < 1:3612953/51‑1 (MQ=255) attttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGa < 1:5505767‑M1/35‑1 (MQ=255) ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa > 1:6285992‑M1/16‑51 (MQ=255) ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa > 1:34266‑M1/16‑51 (MQ=255) ttttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa < 1:440646‑M1/36‑1 (MQ=255) tttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt < 1:3001960‑M1/37‑1 (MQ=255) tttccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt > 1:2101698‑M1/15‑51 (MQ=255) tttCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt < 1:5750029/50‑1 (MQ=255) tttCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATa > 1:2127690/1‑51 (MQ=255) tttCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATa < 1:6418277/51‑1 (MQ=255) ttCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAg > 1:633975/1‑51 (MQ=255) tccagccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAg < 1:3470380‑M1/39‑1 (MQ=255) tCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGc > 1:1039880/1‑51 (MQ=255) tCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGc < 1:5945160/51‑1 (MQ=255) agccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGccc < 1:2822224‑M1/42‑1 (MQ=255) gccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcccc < 1:1452997‑M1/43‑1 (MQ=255) ccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt < 1:5054625‑M1/44‑1 (MQ=255) ccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt > 1:4166461‑M1/8‑51 (MQ=255) ccggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt > 1:3763087‑M1/8‑51 (MQ=255) cggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa < 1:3825851‑M1/45‑1 (MQ=255) cggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa < 1:3692773‑M1/45‑1 (MQ=255) cGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa < 1:1543458/51‑1 (MQ=255) ggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTaa > 1:3488912‑M1/6‑51 (MQ=255) ggggcTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTaa > 1:3708384‑M1/6‑51 (MQ=255) gAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTaa < 1:3192561/51‑1 (MQ=40) gTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata > 1:6719287/1‑51 (MQ=35) gTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata < 1:487547/51‑1 (MQ=35) gTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata < 1:1869083/51‑1 (MQ=35) tATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat > 1:2247399/1‑51 (MQ=33) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:374474‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:3405482‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:1763208‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:1518868‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:5882123‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:5794715‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:2489831‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:1176783‑M1/2‑51 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:111707‑M1/50‑1 (MQ=255) cTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 1:1614740‑M1/2‑51 (MQ=255) | TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG > REL606/3651041‑3651140 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |